- Transcript 'KH2012:KH.C3.17.v3.R...' >
- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C2.321.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S44.g01906.01.t
Possible name(s)
MUC4; PPP2R1B; SF3B1
Gene model
Location
S44 [347,149 / 356,462]
Amino acid sequence
Length: 1,346
>Harore.CG.MTP2014.S44.g01906.01.p
MATKEDYVSEIEAIQRKKAALTVDQNNGDEPEEPPKDKDARVGLGQEGFYDQEIYGGTKS
KFDGYVTSIAPNEQEDEDEVDTGNEALLNKRQAYTAPVALLNDIPQSDESYDPFAETRSQ
PILNREDQYRRQRLQRAISPARHDPFADGGKTPDPKLAQYKDIMTHQALSKEEREIRSKI
SEKLKSGDLHVNGAEAKAAAAAAAAPRERKRRWDATPTPAADAPKKRMTWDQADTGAPTP
SVQRWDETPGRSKGGETPGGMATPGQSTRMWDSTPSHVSSGAVTPGHATPGVGGTPSARK
NRWDETPKTERETPGRSMGWAETPKVDRGDESERIPGGTSKRKSRWDLTPAAATPGNQTP
GSATPVFTPGGTPSSFTPKSGMTTPGTMGTPSLFTPSGVTPIGAKAMGMPTPSPGQLMSM
TPEQLQAWRWEREIDERNRPLADEELDTMFPEGYKVLAPPTGYIPIRTPARKITATPTPM
SGASGFHIQVEDKSMKGMTDQPTGNLPFLKPDDIQYFDKLLVDVDEDTLSPEEQKERKIM
KLLLKIKNGTPPMRKSALRQITDKSREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDR
ILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISVMRPDID
NMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKITQQIAILMGCA
ILPHLRNLVEIIEHGLEDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRTH
RGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCAT
DGVEPKYIKNEILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEMVQRIVDDLK
DENEQYRKMVMETIDKILVNLGAADIDHRLEEQLIDGILYAFQEQTQEDIVMLNGFGTVV
NTLGKRVKPYLPQICGTVLWRLNNKAAKVRQQAADLISRISVVMRTCQEEKLMGHLGVVL
YEYLGEEYPEVLGSILGALKSIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDL
VGRIADRGAEYVGAREWMRICFELLELLKAHKKSIRRATVNTFGYIAKAIGPHDVLATLL
NNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYI
GEMGKDYIYAVCTLLEDALMERDLVHRQIASAAIGHMSLGVYGFGCEDALNHILNYVWPN
IFETSPHVIQAVMSAIDGMRIALGPCRLLQYCLQGLFHPARKVRDVYWKVYNSIYIGAQD
SLVPSYPRFYNDDKNQYLRYELDYVL
Nucleotide sequence
Length: 4,041
>Harore.CG.MTP2014.S44.g01906.01.t
ATGGCAACCAAAGAAGATTATGTGTCTGAAATCGAAGCTATTCAGAGGAAAAAGGCCGCG
CTGACCGTTGATCAAAATAATGGCGACGAACCAGAAGAGCCGCCGAAAGATAAAGATGCC
AGGGTTGGCCTGGGACAAGAAGGATTTTATGATCAAGAAATCTATGGCGGAACAAAAAGC
AAATTCGATGGATACGTAACATCGATTGCACCGAATGAACAGGAGGATGAAGATGAAGTG
GACACAGGTAATGAAGCTCTGTTGAATAAACGTCAAGCATACACAGCGCCTGTTGCTCTG
CTCAATGATATTCCTCAAAGCGATGAATCTTACGATCCTTTCGCTGAAACTCGTTCTCAA
CCGATCTTAAATCGTGAAGATCAATATCGAAGGCAAAGGTTACAGAGAGCCATTTCACCG
GCTCGCCATGATCCGTTTGCGGACGGCGGGAAAACGCCGGACCCAAAATTAGCTCAGTAT
AAAGATATTATGACTCACCAGGCTCTTTCTAAAGAGGAAAGAGAAATACGTTCTAAAATC
AGCGAGAAACTAAAATCTGGAGATTTACATGTGAACGGAGCCGAGGCGAAAGCAGCAGCC
GCAGCAGCAGCAGCTCCAAGAGAGAGAAAACGAAGATGGGACGCAACACCTACTCCTGCA
GCAGATGCCCCGAAGAAACGAATGACCTGGGACCAAGCTGATACCGGTGCCCCGACTCCG
AGTGTCCAGCGATGGGATGAAACACCAGGCAGATCAAAGGGAGGAGAAACTCCTGGTGGT
ATGGCAACTCCAGGACAAAGTACCAGAATGTGGGACTCAACTCCAAGCCACGTTAGTTCT
GGAGCAGTGACACCAGGACATGCTACCCCTGGAGTCGGAGGTACACCAAGTGCTCGTAAA
AACAGATGGGACGAGACCCCCAAGACAGAAAGAGAAACTCCTGGCAGATCAATGGGTTGG
GCAGAGACCCCAAAAGTTGACAGAGGGGATGAAAGTGAGAGAATTCCCGGTGGCACAAGC
AAAAGAAAGTCTAGATGGGACTTAACACCTGCTGCAGCGACTCCCGGGAACCAAACCCCA
GGAAGTGCGACTCCTGTGTTTACTCCTGGTGGCACGCCGTCCTCTTTCACCCCAAAATCT
GGCATGACTACACCCGGGACTATGGGCACACCTTCTCTTTTCACCCCTTCTGGTGTCACC
CCGATCGGGGCCAAGGCTATGGGTATGCCGACTCCTTCACCCGGCCAGCTGATGTCCATG
ACCCCTGAGCAACTTCAAGCATGGAGATGGGAACGTGAAATTGATGAACGTAACCGTCCA
CTAGCGGATGAAGAACTAGATACCATGTTTCCAGAAGGATACAAAGTTCTAGCGCCCCCT
ACTGGATACATTCCAATTCGTACGCCGGCTCGTAAAATCACAGCGACCCCCACACCAATG
TCTGGGGCTAGTGGGTTTCACATTCAAGTAGAGGACAAGTCCATGAAAGGCATGACTGAT
CAACCAACAGGAAATCTTCCATTTCTGAAGCCGGATGACATTCAGTATTTTGACAAATTG
CTCGTGGATGTGGACGAGGATACTCTGAGCCCCGAAGAACAAAAAGAACGGAAGATAATG
AAACTGCTGTTAAAAATTAAAAACGGAACTCCCCCTATGAGGAAGAGTGCTTTGAGACAG
ATCACGGACAAGTCAAGAGAGTTTGGCGCTGGTCCTCTGTTCAATCAAATCCTTCCTCTT
CTCATGTCTCCAACACTGGAAGATCAAGAACGCCATCTTCTTGTTAAGGTAATCGATCGC
ATTCTGTACAAACTCGACGACTTGGTTCGTCCGTACGTTCACAAGATCCTCGTTGTCATT
GAACCCTTGCTCATTGATGAAGATTATTACGCCAGGGTTGAAGGTCGTGAAATCATTTCG
AATCTGGCAAAAGCAGCAGGTCTTGCGACCATGATTTCTGTCATGAGACCTGATATTGAT
AACATGGATGAGTACGTCCGTAACACAACCGCTAGAGCATTCGCTGTCGTTGCATCTGCA
CTAGGAATTCCATCTCTGCTTCCTTTCTTGAAAGCCGTTTGCAGAAGCAAGAAATCTTGG
CAGGCTCGTCACACTGGTATCAAGATCACCCAACAGATTGCCATTCTCATGGGATGTGCT
ATACTTCCTCACTTGAGAAATTTGGTTGAGATTATTGAACACGGCCTGGAGGATGAACAA
CAGAAAGTCAGAACAATCACTGCTCTTGCTTTGGCTGCGTTGGCAGAAGCCGCCACACCG
TATGGTATCGAGTCCTTTGACAGTGTATTGAAACCTTTGTGGAAAGGTATCAGAACACAT
AGAGGTAAAGGTTTGGCGGCGTTTTTGAAAGCTATCGGCTATCTCATTCCACTTATGGAT
GCCGAATACGCAAACTATTACACTCGTGAAGTCATGTTGATTTTGATCCGAGAATTTCAG
TCTCCTGACGAAGAAATGAAGAAGATTGTCTTGAAGGTTGTCAAGCAATGTTGTGCTACT
GATGGTGTCGAACCTAAGTACATCAAAAATGAGATTCTTCCCCCATTTTTCAAACATTTC
TGGAACCAGAGGATGGCCCTGGATCGTCGTAACTACAGGCAACTTGTCGACACAACGGTT
GAGATTGCGAATAAGGTTGGGGCAGCTGAAATGGTTCAAAGAATTGTGGATGACCTTAAG
GATGAGAATGAACAATATCGTAAGATGGTTATGGAAACAATCGATAAAATCTTGGTTAAT
CTGGGTGCTGCTGATATTGATCACAGACTGGAAGAACAGCTTATCGATGGTATACTCTAT
GCGTTTCAAGAACAGACCCAAGAAGACATTGTAATGCTGAACGGTTTTGGAACGGTGGTC
AATACCCTTGGAAAAAGAGTGAAACCCTATCTTCCTCAGATTTGCGGTACAGTTCTCTGG
CGTCTCAATAACAAAGCTGCAAAAGTACGTCAGCAAGCAGCCGACCTCATCTCCAGGATC
TCTGTCGTCATGCGAACGTGCCAAGAAGAAAAACTCATGGGTCATCTCGGTGTCGTTCTG
TACGAATACCTGGGTGAAGAATATCCGGAGGTTTTGGGTTCAATATTGGGGGCGCTCAAG
TCTATTGTCAATGTAATAGGTATGCACAAGATGACGCCTCCCATTAAAGATCTTCTTCCT
CGTCTTACTCCGATTCTCAAGAATCGTCACGAGAAAGTTCAGGAGAATTGCATCGATCTT
GTCGGTCGTATCGCAGATCGTGGTGCAGAATATGTCGGTGCAAGAGAATGGATGAGAATA
TGTTTCGAGTTGCTTGAATTACTGAAGGCTCACAAGAAATCCATTCGAAGAGCAACAGTC
AACACCTTCGGATACATCGCCAAAGCCATCGGCCCACACGACGTCCTCGCTACATTATTA
AACAACTTGAAAGTGCAAGAGCGTCAAAATCGTGTGTGCACAACAGTCGCTATAGCCATT
GTCGCCGAGACTTGCTCCCCTTTCACTGTTTTACCAGCTCTTATGAATGAGTATCGAGTC
CCTGAGCTCAATGTGCAGAATGGAGTCTTGAAGGCTCTTTCGTTCCTTTTCGAATACATT
GGTGAAATGGGGAAAGATTACATTTATGCTGTGTGCACACTTCTTGAAGACGCCCTAATG
GAAAGAGATTTAGTCCACAGACAGATCGCATCTGCCGCAATCGGTCATATGTCGCTCGGT
GTGTATGGATTCGGCTGCGAGGACGCTCTCAATCACATTCTCAATTATGTCTGGCCAAAC
ATATTCGAAACGTCACCACACGTGATCCAAGCTGTCATGTCGGCCATAGATGGAATGAGA
ATTGCTCTGGGACCGTGCAGACTTCTACAATACTGTCTTCAGGGATTGTTTCATCCTGCC
AGGAAGGTTAGAGATGTGTATTGGAAAGTCTACAACAGCATATACATCGGAGCGCAAGAC
AGTCTCGTTCCTTCCTATCCTCGTTTCTATAACGACGACAAGAACCAGTATCTTCGCTAT
GAGCTCGACTATGTCCTCTAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF3B1_HUMAN | 78.955 % | 2135 | 0 |