Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S45.g04201.01.t

Possible name(s)

ASIC1; ASIC2; ASIC3

Gene model

Harore.CG.MTP2014.S45.g04201

Location

S45 [319,306 / 329,643]

Sequences

Amino acid sequence

Length: 217

>Harore.CG.MTP2014.S45.g04201.01.p
MERIIDDDTSTTSSDDNRPSNIHVFAGNSTLHGFSHIFARHHSSLRKFTWTVAFLTSLTL
LLFQSSNRVTYYLDFPHVTRLDEVAAGNLSFPAVTICNLNEFRFSKITKNDMYHAGQLLG
FLNVNDTPIEPSYYSDFDDMEPSLRDRLLLTKSQIEHLTDFSGDFVVNGDFNMYEFYHRT
GHDLSEYLLACKYRGTPCNRTWFSERCAHSDFTSRFD

Nucleotide sequence

Length: 1,816

>Harore.CG.MTP2014.S45.g04201.01.t
ATTATTTAGATGTTTTGAAAATACTGTTAGACATAGCTTACTCTATCTGCCGATAAGTTA
TTGTTTGAACACCAATCTACTGGTTATAACATTATAATGGAACGTATTATTGACGATGAT
ACATCAACAACTAGCAGTGATGACAACAGGCCTTCCAATATCCACGTTTTTGCGGGGAAC
TCGACTCTACATGGGTTCAGCCATATCTTTGCACGCCATCATTCATCGCTCAGAAAATTC
ACCTGGACAGTAGCCTTTCTAACTAGCCTGACGCTCCTATTATTTCAGAGCTCAAATCGT
GTGACCTACTATCTTGATTTTCCTCACGTAACGAGACTGGATGAAGTCGCGGCCGGAAAT
CTCAGCTTTCCAGCCGTTACAATATGCAACTTGAACGAATTCAGATTCTCGAAAATTACC
AAGAATGACATGTACCACGCAGGTCAATTACTGGGTTTTCTCAATGTTAATGACACACCT
ATTGAACCAAGCTACTATTCGGATTTTGACGACATGGAACCAAGCTTGCGAGACCGTTTG
CTCTTAACCAAATCGCAAATCGAGCACTTGACTGATTTTTCTGGTGATTTTGTGGTGAAC
GGAGATTTCAACATGTATGAATTCTACCACAGAACAGGGCACGATTTATCGGAATATCTT
CTCGCATGTAAATACAGAGGAACACCATGTAACCGTACGTGGTTTAGCGAGAGATGCGCT
CATTCTGATTTTACAAGCCGGTTTGATTAAATTATGTGAAGGAGCGCCAAAAACCAGGCA
ACTACATAGATGAAACTGAATTTTCAGGATTCAATCCTATTATTTTTATTAGCATATTAT
TTTCTACTGAATCTTGTTGTTCGTTTTTTCGTTATATGTTTATACGTGTATTAGAAAACT
TCTTATTCATTATATTAATTTTTTGCGTCGGGATCATATTATTTCATTGATGATTCGATT
CATATAAATTTTGATTCCAGTTACTGGAAGCGAGTAACGACTTAGCCTAGTCTTCTGATT
CAAACATTGGTATTTGTATTACACGGTTTTCTGGTCATCGTGTCATATCTCTAGCCAAGA
TCTTCGAGTTCTACATTTTCCTAACATTTACGAATATAGGCGTTAATGCGTTTTCATGTT
ACGACATCTGTTACATTTTCCACATTTGGAACTTAGTTCGAGCAAACTAATCCGTAATCG
GGAACGCTTTTTAATAATTTATGAGAATGATTGCGATGCTAATAACTGTGATTAACTTGC
TTTAATGGTTTCCAGAACCTTCTGTTTATATACTACACCGTACCATGTCGCCATTCGAAC
AATATACATTTGTTTATCTCTCGACCCATTCACTGTATCGTATTATTATAATTATGTTTC
CTACGTTCATCCTTAATCGCATTTGCTGAGGGAAACATGGTTTCGGCGAGACGGGAAGAA
TAAAATTATTGAATTTCCGTGCATCAAATCCCCCTTCAGGTAAAGTTTATATCTCGTTTT
TCCAACGTACAGTATGTCCAAAATGTTATTTTAATCTCACCAAGTTGAATTTTCTATCGG
TTTGAACTGTAATACCGAGTCCTAATTTACTTCTCCACGTTTTCAATTTACAAAATTCCC
TTTAGATTAGATTAAATTAGAACTGGTTCCTAAATATTGGAATGCCTCCACTGCACTGGG
GTGTAATGCGAAACTTTGTAATCATGAGAAGAGTAGCCTATATTTCCCCACTTCTCAACC
TTTTTCCAAGATTAAAAAAATAAAATATTTTTTCATGAGACCATTATGTTTGTTTCATTT
ATGCAATGAGAATTCA

InterProScan

Pfam	ENaC (IPR001873) - T[25-205] 5.0E-28
PRINTS	ENaC (IPR001873) - T[47-64] 3.9E-8 - T[87-103] 3.9E-8 - T[188-199] 3.9E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ASIC2_HUMAN	42.857 %	169	6.08E-50
ASIC1_HUMAN	44.385 %	158	8.31E-46
ASIC3_HUMAN	35.533 %	119	3.95E-31