- Clone 'ciad072i18' >
- Transcript 'KH2012:KH.C1.1273.v1...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S45.g15766.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S45 [404,459 / 408,704]
Amino acid sequence
Length: 582
>Harore.CG.MTP2014.S45.g15766.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQITW
AFHCILLLLLPDAATITTKMKICCLVLLVICVSAKNGNSCVTPTLKEDVDWETLANVKGI
WYDVLETKANTSGGDLDCFNWHDFQKTDDGFTAVIEMMSYESPMKYNIEMVGLRKQGSVG
VYYFHEANKLEFKENQGELTNGESNHEAVDEVYAAEQVFLTDYETYFIHALCAESGWKVW
IKSLKHVPTRTTILKIWRALVKHEIDAEIWFSQCVDKYCEEK
Nucleotide sequence
Length: 1,749
>Harore.CG.MTP2014.S45.g15766.01.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCAGGATTGGTT
AAATCTGGTTTTGCTGGTGACGATGCTCCAAGAGCTGTTTTTCCATCAATCGTAGGACGC
CCCAGACATCAAGGTGTCATGGTTGGTATGGGACAGAAAGACAGCTATGTAGGAGACGAA
GCTCAAAGCAAACGTGGTATTCTCACATTGAAATATCCGATTGAACACGGAATTATTACC
AATTGGGACGATATGGAGAAGATTTGGCATCATACTTTCTACAATGAACTTCGTGTTGCC
CCTGAAGAACATCCAACTCTTCTTACGGAAGCTCCATTGAATCCAAAGGCAAACAGGGAA
AAGATGACACAAATTATGTTCGAAACGTTTAACGTACCGGCAATGTACGTTGCCATCCAA
GCAGTTCTTTCGCTATACGCATCTGGAAGAACGACAGGAATTGTACTTGATTCCGGGGAC
GGTGTCTCCCACAATGTTCCCATTTATGAAGGATACGCTCTCCCACACGCCATTGCCAGA
CTGGACTTGGCTGGGCGAGACCTCACTGATTACTTAATGAAGATTCTCACAGAGAGAGGA
TACTCGTTCGTTACAACCGCTGAGCGTGAAATCGTTCGTGATATTAAGGAAAAACTTTGC
TATGTTGCCCTCGATTTCGAACAGGAAATGGCAACCGCCGCATCATCGACTTCACTGGAA
AAAAGCTATGAGCTCCCCGATGGCCAAGTTATCACCATCGGTAACGAGAGATTCCGATGC
CCTGAAACTCTTTTCCAGCCCTCCTTTATCGGAATGGAATCGGCCGGTATTCACGAAACC
ACGTACAATTCCATCATGAAGTGCGATATCGATATCAGAAAAGATCTCTATGCCAACAAC
GTCCTGTCTGGAGGAACCACAATGTATCCTGGTATTGCTGATCGTATGCAGAAGGAAATA
ACTGCTCTTGCACCAAGTACGATGAAGATCAAAATTATCGCTCCTCCAGAACGTAAATAC
TCTGTATGGATTGGAGGATCTATCCTAGCATCTCTCTCTACCTTCCAACAGATTACATGG
GCATTTCACTGCATACTACTACTCCTACTGCCAGACGCTGCAACTATTACTACAAAGATG
AAGATATGCTGCCTTGTACTCCTAGTTATATGCGTTAGTGCTAAGAACGGCAATTCCTGT
GTTACGCCGACTCTTAAGGAAGATGTTGATTGGGAAACGCTTGCAAATGTGAAAGGAATA
TGGTACGACGTGCTCGAAACGAAAGCCAATACATCAGGTGGTGATCTGGATTGTTTCAAC
TGGCACGACTTCCAAAAAACAGATGATGGATTCACAGCAGTAATTGAAATGATGAGCTAC
GAATCTCCTATGAAGTACAACATTGAAATGGTTGGGCTTCGTAAACAGGGATCAGTCGGA
GTTTACTATTTTCACGAGGCTAACAAACTGGAATTCAAAGAGAACCAAGGTGAGCTTACA
AACGGAGAATCAAATCATGAAGCTGTTGATGAAGTCTACGCTGCAGAGCAAGTCTTTCTC
ACTGACTACGAAACGTATTTCATTCATGCATTGTGCGCGGAATCGGGATGGAAGGTATGG
ATTAAGTCTCTTAAACACGTACCAACCCGTACCACAATTCTGAAAATCTGGCGGGCGTTG
GTGAAACACGAAATCGATGCAGAAATCTGGTTTAGCCAGTGCGTAGACAAGTACTGCGAA
GAAAAATAA
| PANTHER |
Actin (IPR004000) - T[5-358] 9.3E-252 |
| Pfam |
Actin (IPR004000) - T[6-358] 5.4E-134 |
| SMART |
Actin (IPR004000) - T[8-382] 1.6E-211 |
| PRINTS |
Actin (IPR004000) - T[29-38] 6.3E-57 - T[52-63] 6.3E-57 - T[64-86] 6.3E-57 - T[118-131] 6.3E-57 - T[143-162] 6.3E-57 - T[239-255] 6.3E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.175 % | 721 | 0 |
| ACTS_HUMAN | 97.175 % | 722 | 0 |
| ACTC_HUMAN | 97.458 % | 723 | 0 |