- Transcript 'KH2012:KH.L170.28.v4...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S461.g12874.01.t
Possible name(s)
DDX3X; DDX3Y; DDX4
Gene model
Location
S461 [25,354 / 27,427]
Amino acid sequence
Length: 690
>Harore.CG.MTP2014.S461.g12874.01.p
MFEDEDWDIDEVGAGDKSNYSAFESKSNSAFGGDFNRGHGIEENRNGFDSGEYPSSNSFN
NTDFGQGRGRGRRIDNSSGGSATRSCFKCGEVGHMSKDCSSAATGSSGFGRGGRSRGCFK
CGEDGHMARECPSDTSSGFNGGGGRSRGCFKCGQDGHMARDCLSGESLGFNGSTEGKGSY
KRGNGENNTDRPPIYVPPPPPEEEKLMYSTVQTGIHFDNYDTIPVEVTGENPPGGISSFD
EADLPETVRQNIRKANYKKPTPVQKYSIPIVNSDRDLMACAQTGSGKTAAFLLPVLRGMV
KNGITNDMFSEKQLPQAVVVGPTRELVYQIFLETRKFSKNTIIKPVVAYGGTSVAHQLSQ
LSRGCNILIATPGRLLDFINRGKVGLANLQYLILDEADRMLDMGFEPEIRRLVAAPDIPD
KYNRHTLMFSATFPNNIQELAHEFLRDDFLFLTVGRVGGACSDVTQTVLQVDNNDKREAL
MQLIVDVEETKAKTLVFVDTKRNADFLACFLSQEGYPTTSIHGDRLQQEREQALYDFKTG
VCPILIATSVAARGLDIPKVEHVINFDLPSEIDEYVHRIGRTGRCGNLGQATSFYCDDKD
GALARSLVKILADSQQEVPGWLENCAESAVGTSFGAGRGQFGAQDARKAGSGRAQMCSRQ
TTDCDYNDGGGTSTKQQSGFDAFCNDECWD
Nucleotide sequence
Length: 2,073
>Harore.CG.MTP2014.S461.g12874.01.t
ATGTTTGAAGACGAAGATTGGGATATTGATGAAGTTGGTGCGGGAGACAAAAGTAATTAT
TCGGCATTTGAATCGAAATCTAATTCTGCATTTGGAGGAGATTTCAATAGGGGCCATGGA
ATTGAGGAAAATCGGAATGGATTTGATTCTGGCGAATACCCTTCCAGCAATAGTTTTAAC
AATACGGACTTCGGACAAGGAAGGGGAAGAGGAAGAAGAATAGATAATTCATCAGGTGGA
TCTGCTACAAGATCATGCTTCAAGTGTGGCGAGGTGGGCCATATGTCAAAGGACTGCTCT
TCGGCTGCGACTGGTTCTTCTGGATTTGGAAGAGGAGGTAGAAGCAGAGGATGCTTTAAG
TGTGGCGAAGATGGCCACATGGCGAGAGAGTGCCCTTCAGATACGTCATCGGGATTTAAT
GGAGGAGGAGGTAGAAGCAGAGGATGCTTTAAGTGTGGCCAAGATGGCCACATGGCAAGA
GACTGCCTATCTGGGGAATCTTTAGGATTCAATGGTTCAACAGAGGGCAAAGGAAGCTAT
AAACGAGGTAATGGAGAGAATAATACCGATAGACCACCGATATATGTACCGCCTCCACCG
CCAGAGGAAGAGAAATTGATGTACTCCACTGTGCAAACCGGAATACATTTCGACAATTAT
GACACAATACCGGTAGAGGTCACAGGAGAAAATCCTCCAGGAGGCATATCGTCTTTTGAC
GAAGCAGACCTGCCTGAAACTGTACGGCAAAACATCAGAAAAGCAAATTACAAGAAACCT
ACGCCTGTGCAGAAATACAGCATACCGATTGTGAATTCTGATAGGGATTTAATGGCTTGT
GCTCAAACAGGCTCTGGGAAGACAGCAGCTTTTCTTTTGCCTGTTCTTCGTGGAATGGTA
AAGAACGGGATCACTAATGATATGTTTTCTGAAAAACAATTACCGCAAGCTGTTGTAGTT
GGCCCTACAAGAGAACTGGTGTATCAGATTTTTCTGGAGACTAGAAAATTTTCAAAGAAC
ACAATCATCAAACCAGTTGTTGCATACGGAGGAACCAGCGTAGCGCATCAGTTGTCTCAG
CTGAGTCGAGGATGTAATATCCTCATAGCTACTCCTGGACGCCTGCTGGATTTTATCAAC
CGAGGTAAAGTCGGCCTGGCCAATTTGCAGTATCTGATATTAGACGAAGCTGACCGGATG
CTTGACATGGGATTTGAGCCGGAAATAAGACGGCTTGTCGCTGCGCCGGATATCCCAGAT
AAGTATAACCGTCATACCCTCATGTTCAGTGCCACATTCCCGAACAACATTCAGGAATTG
GCCCATGAGTTTCTTCGTGACGACTTTTTGTTTCTGACTGTTGGTCGCGTGGGTGGAGCT
TGTTCTGATGTGACGCAAACTGTCCTGCAAGTGGACAACAATGATAAAAGAGAAGCACTG
ATGCAGTTAATTGTTGATGTGGAGGAAACTAAAGCAAAAACTTTGGTTTTTGTTGATACA
AAACGCAATGCTGATTTCCTAGCATGCTTTCTTTCTCAAGAAGGTTATCCTACTACAAGC
ATTCATGGAGACAGACTGCAGCAAGAAAGAGAACAGGCATTGTATGATTTCAAAACTGGA
GTCTGCCCTATTCTCATTGCTACTTCTGTTGCTGCTCGAGGATTGGACATACCGAAAGTG
GAGCATGTCATAAATTTTGATCTGCCGTCAGAAATAGACGAATACGTTCACCGTATCGGG
CGTACCGGGCGCTGTGGAAACTTGGGTCAAGCAACGTCTTTCTATTGCGATGACAAAGAT
GGTGCTCTTGCAAGATCACTGGTTAAAATCCTTGCTGATTCGCAACAGGAGGTACCAGGC
TGGTTGGAAAACTGTGCAGAGAGCGCTGTAGGAACAAGCTTCGGAGCTGGCAGAGGACAG
TTTGGAGCTCAGGATGCCAGAAAAGCAGGATCTGGACGTGCACAAATGTGCTCTAGACAA
ACCACCGACTGCGACTATAACGACGGCGGTGGTACAAGCACGAAGCAACAGTCAGGCTTT
GATGCCTTTTGCAATGACGAATGCTGGGATTAA
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[68-103] 2.62E-6 - T[108-163] 5.46E-9 |
| Pfam |
Znf_CCHC (IPR001878) - T[85-100] 6.3E-7 - T[116-133] 5.1E-7 - T[147-162] 1.4E-5 |
| SMART |
Znf_CCHC (IPR001878) - T[85-101] 8.3E-5 - T[117-133] 1.1E-5 - T[148-164] 8.5E-5 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[86-99] 10.609 - T[118-133] 11.383 - T[149-162] 11.037 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[237-265] 11.96 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[256-467] 3.8E-57 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[261-440] 2.7E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[268-451] 30.258 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[315-599] 2.09E-72 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[393-401] . |
| CDD |
Helicase_C (IPR001650) - T[463-594] 5.84129E-40 |
| Pfam |
Helicase_C (IPR001650) - T[475-586] 1.7E-30 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[479-626] 23.495 |
| SMART |
Helicase_C (IPR001650) - T[505-586] 7.0E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX3Y_HUMAN | 51.695 % | 478 | 1.21E-160 |
| DDX3X_HUMAN | 51.579 % | 481 | 3.85E-162 |
| DDX4_HUMAN | 53.832 % | 546 | 0 |