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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S47...' > 
  2. Molecular Tool 'FOG-MO2 (Lemaire Lab)' > 
  3. Transcript 'KH2012:KH.C1.1006.v1...' > 
  4. Transcript 'KH2012:KH.C7.147.v2....' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S46.g03741.02.t

Possible name(s)

HES1; HES2; HES4

Gene model

Harore.CG.MTP2014.S46.g03741

Location

S46 [362,013 / 364,099]

Sequences

Amino acid sequence

Length: 316

>Harore.CG.MTP2014.S46.g03741.02.p
MFGMICFCSNTNFKSYRKHIIVMPAERRMTSAEIRRKTNKPIMEKKRRERINRCLDELKN
IVLRAVNEESRPNKLEKADILEMTVRYLRTIKPVKQSADCALFCQPGGNSVEMRQRNTIK
DQIHMNHSPTMVKQEHVRFPTQTMKSILQLDVASRYPMEYPVNNRTPVPNYVGKYSPIPV
SPISSASSKSPCRDLPFEEQNVLPTNPAFHGFRPDSYSCNLVQKSKSFASGNECESRLYS
PSALSNSSSTLTTNMSSTRSGDLWSPSNSHDSSLEFQSNSYQINEETDSFIWRPWTAVNY
RALGLTNCLTAQPTRN

Nucleotide sequence

Length: 951

>Harore.CG.MTP2014.S46.g03741.02.t
ATGTTCGGGATGATTTGCTTCTGCTCAAATACTAATTTTAAAAGTTACAGGAAACATATT
ATCGTGATGCCGGCTGAGCGAAGAATGACAAGCGCAGAAATTCGTCGTAAGACGAACAAA
CCGATCATGGAAAAGAAACGCCGTGAAAGAATTAATCGTTGCTTGGATGAACTGAAAAAT
ATAGTCCTACGTGCTGTTAATGAAGAGTCACGTCCAAACAAACTTGAGAAAGCTGATATC
CTGGAGATGACAGTTCGTTATTTGAGAACAATTAAGCCAGTTAAACAATCTGCAGATTGT
GCACTATTTTGTCAACCTGGAGGAAACTCCGTAGAGATGAGGCAAAGGAATACTATCAAA
GACCAAATCCACATGAATCATTCCCCCACAATGGTCAAGCAAGAACACGTACGATTTCCG
ACTCAGACAATGAAAAGTATATTACAACTGGATGTTGCCAGCAGATATCCAATGGAGTAT
CCCGTCAATAACAGAACACCTGTGCCAAACTACGTAGGAAAATACTCTCCCATACCAGTA
TCGCCTATATCTTCTGCTTCATCAAAATCGCCCTGCAGAGACCTTCCTTTCGAAGAACAA
AACGTACTTCCTACGAACCCAGCTTTCCATGGGTTCAGACCTGACTCGTACAGTTGCAAT
CTGGTTCAGAAATCAAAATCATTCGCTTCGGGAAACGAATGCGAATCTCGACTGTATTCG
CCCTCTGCTTTGTCAAATTCATCCAGTACGCTGACTACAAACATGTCATCTACCCGAAGC
GGCGATTTGTGGTCGCCTAGTAACAGTCACGATTCGTCGCTTGAGTTCCAATCCAACTCT
TATCAGATTAATGAGGAAACTGATTCCTTCATCTGGCGCCCATGGACTGCTGTTAACTAC
AGAGCGCTCGGACTAACTAACTGCTTGACAGCGCAACCCACGCGAAACTAG

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[28-93] 5.0E-23
CDD
bHLH_dom (IPR011598) - T[33-89] 3.67416E-14
ProSiteProfiles
bHLH_dom (IPR011598) - T[35-91] 15.18
Pfam
bHLH_dom (IPR011598) - T[36-90] 3.0E-13
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[36-93] 3.79E-13
SMART
bHLH_dom (IPR011598) - T[41-97] 1.4E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value