- Transcript 'KH2012:KH.S404.1.v3....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g51445.01.t
Possible name(s)
EEF1A1; EEF1A2; HBS1L
Gene model
Location
chrUn [316,393,692 / 316,395,380]
Amino acid sequence
Length: 460
>Boschl.CG.Botznik2013.chrUn.g51445.01.p
MVKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETERYNITIIDAPGHRDFIKNMITGTSQADCAVLIVASGT
GEFEAGISKNGQTREHALLAFTLGVKQMIVAVNKIDSTEPPYSEARFLEIKKEVSAYLKK
IGYNPAKVPFMPVSGWHGDNMLEPSEKTKWFKGAELGGKVDTKLNCLVKALDNIEEPKRP
TDKPLRLPLQDVYKIGGIGTVPVGRVETGKLKPGMVVTFAPAAISTEVKSVEMHHESLAE
ALPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPTQKSDFTAQVIILNHPGQINAGYAPVL
DCHTAHIACKFSELKEKIDRRSGKKLEENPKFVKSGDAAIVTLIPSKPMCVETFASYPPL
GRFAVRDMRQTVAVGVIKGVTAKVVDAKQTKAAKKVAGKK
Nucleotide sequence
Length: 1,383
>Boschl.CG.Botznik2013.chrUn.g51445.01.t
TGGTTAAAGAAAAGGTTCATATCAATATCGTGGTCATTGGCCACGTAGATTCCGGAAAAT
CCACAACTACTGGACATCTCATCTACAAATGCGGCGGTATCGACAAAAGAGCGATCGAAA
AATTTGAGAAGGAAGCCCAGGAGGTGGGCAAAGGCTCCTTCAAGTACGCCTGGGTGTTGG
ACAAACTGAAGGCAGAGAGAGAACGTGGTATTACCATTGATATTGCGCTCTGGAAATTCG
AAACGGAGAGATACAACATCACCATCATCGATGCTCCCGGCCATCGTGATTTCATCAAGA
ACATGATCACTGGTACTTCGCAAGCAGATTGCGCTGTCCTGATTGTCGCATCCGGTACCG
GAGAGTTTGAAGCTGGCATCTCGAAAAACGGACAAACCCGAGAGCATGCTCTGCTCGCTT
TCACTCTCGGCGTGAAGCAAATGATCGTGGCTGTAAACAAGATCGACAGCACCGAGCCGC
CATACTCTGAAGCAAGGTTCTTAGAAATCAAAAAAGAAGTGTCGGCATACTTGAAAAAGA
TTGGTTACAATCCTGCTAAAGTACCATTCATGCCCGTGTCTGGATGGCATGGTGATAACA
TGTTGGAACCCAGCGAGAAGACTAAATGGTTCAAGGGAGCGGAACTTGGAGGCAAAGTCG
ACACCAAGTTGAACTGCCTCGTCAAGGCTTTAGATAACATTGAGGAACCTAAGCGACCAA
CTGACAAACCGCTCCGTCTCCCACTTCAGGATGTCTACAAAATTGGAGGTATTGGAACAG
TGCCAGTTGGCCGTGTTGAAACCGGCAAACTCAAACCTGGAATGGTCGTGACATTCGCCC
CTGCTGCAATTTCAACTGAAGTCAAGTCCGTTGAAATGCATCACGAATCTCTCGCCGAAG
CTTTACCTGGCGACAATGTTGGTTTCAACATCAAGAACGTGTCCGTGAAAGAGATCCGTC
GTGGAAACGTTGCCGGCGATAGCAAAAATGACCCTCCCACCCAAAAATCTGATTTCACCG
CACAGGTCATCATCCTTAATCACCCTGGTCAAATCAATGCCGGTTACGCTCCGGTCCTTG
ACTGTCATACTGCTCACATTGCTTGCAAGGTCTCTGAACTCAAGGAGAAAATTGATCGAC
GATCTGGTAAAAAGCTTGAAGAGAACCCGAAGTTCGTGAAATCTGGTGACGCTGCAATTG
TGACACTGATTCCATCCAAGCCGATGTGTGTCGAAACCTTCGCCAGTTATCCCCCACTTG
GTCGATTCGCTGTCCGTGACATGAGACAGACTGTCGCCGTCGGTGTTATCAAAGGCGTAA
CTGCCAAGGTTGTCGATGCCAAGCAAACGAAAGCAGCTAAAAAAGTCGCCGGAAAGAAGT
GAC
| TIGRFAM |
Transl_elong_EF1A_euk/arc (IPR004539) - T[1-443] 1.5E-218 |
| Hamap |
Transl_elong_EF1A_euk/arc (IPR004539) - T[2-443] 50.854 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[3-260] 1.48E-79 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[5-241] 60.109 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[6-202] 4.2E-54 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[9-22] 2.5E-24 - T[68-76] 2.5E-24 - T[88-98] 2.5E-24 - T[104-115] 2.5E-24 - T[148-157] 2.5E-24 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[61-76] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[237-333] 6.41E-29 |
| Pfam |
EFTu-like_2 (IPR004161) - T[259-324] 9.7E-14 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[334-440] 2.9E-41 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[337-440] 1.22E-44 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EF1A1_HUMAN | 80.744 % | 763 | 0 |
| EF1A3_HUMAN | 80.306 % | 758 | 0 |
| EF1A2_HUMAN | 80.562 % | 762 | 0 |