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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S479.g01342.01.t

Possible name(s)

COX4I1; COX4I2

Gene model

Harore.CG.MTP2014.S479.g01342

Location

S479 [51,066 / 51,594]

Sequences

Amino acid sequence

Length: 175

>Harore.CG.MTP2014.S479.g01342.01.p
MALNLLRFATQRALMRRAFSSSHILEGQSRAIVEGDPNVNAGFYESLLTPLPKKPRLFCT
TPELQALKSKEAGDWKQLSEEDMKQLYDAYFGMTVTDMIRPDDSWKTIVGVVLFISGFTL
WLHLFIHTFINPPYVKTVLDQEWINATVKKMLQQHQGDVSGYASKWDYENNRWKK

Nucleotide sequence

Length: 528

>Harore.CG.MTP2014.S479.g01342.01.t
ATGGCATTAAACTTGCTGAGATTCGCCACTCAACGAGCGCTAATGCGCCGTGCGTTCAGC
TCGTCCCATATCTTGGAAGGCCAGTCCCGCGCCATTGTCGAAGGAGATCCCAATGTCAAT
GCTGGTTTTTATGAAAGTCTACTCACCCCACTCCCAAAAAAGCCACGCCTGTTTTGCACT
ACCCCGGAACTTCAGGCTCTTAAATCCAAGGAAGCCGGAGATTGGAAACAGCTGTCTGAA
GAAGACATGAAGCAGTTGTATGATGCTTATTTTGGCATGACTGTGACCGATATGATTCGT
CCGGATGACTCGTGGAAGACCATAGTCGGCGTAGTATTATTTATTAGTGGTTTCACGCTT
TGGCTACATCTTTTCATTCATACGTTCATCAATCCGCCTTATGTCAAAACGGTTTTGGAT
CAAGAATGGATTAATGCTACTGTAAAGAAAATGCTTCAGCAACATCAAGGGGACGTCTCG
GGGTACGCCTCAAAATGGGATTACGAAAACAACAGATGGAAGAAATAG

InterProScan

PANTHER
Cyt_c_oxidase_su4_fam (IPR004203) - T[4-175] 6.6E-36
Gene3D
Cyt_c_oxidase_su4_sf (IPR036639) - T[30-175] 1.7E-40
SUPERFAMILY
Cyt_c_oxidase_su4_sf (IPR036639) - T[33-175] 4.45E-34
Pfam
Cyt_c_oxidase_su4_fam (IPR004203) - T[45-174] 3.1E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COX41_HUMAN 31.25 % 89 9.3E-23
COX42_HUMAN 35.484 % 92.4 3.81E-24