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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.C5.66.v1.A...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g51479.01.t

Possible name(s)

RPL6

Gene model

Boschl.CG.Botznik2013.chrUn.g51479

Location

chrUn [316,527,501 / 316,529,389]

Sequences

Amino acid sequence

Length: 176

>Boschl.CG.Botznik2013.chrUn.g51479.01.p
PRYYPTEDRPRKLKSHGKKPFSQHKRNLRDSITPGTVLIILAGRHKGKHVVFLKQLASGL
LLCTGPLKVNGFPMRRLCQKFVIATKTKIDISGVKIPRHINDAYFKRAAKKKSRHGEGEI
FDTKKEEYVVSDQRKEDQKTVDAMILPIIKKTEYLEGYLGSKFRLQTGQYPHTMVF

Nucleotide sequence

Length: 531

>Boschl.CG.Botznik2013.chrUn.g51479.01.t
CCCGTTACTATCCCACCGAGGATCGGCCGCGTAAACTGAAATCTCACGGCAAGAAGCCCT
TCAGCCAGCACAAACGAAATCTTCGAGATTCCATCACCCCCGGAACGGTTCTCATCATTC
TTGCTGGCAGACACAAGGGAAAACATGTCGTCTTCTTGAAACAGCTGGCCTCTGGCCTGC
TTCTGTGCACTGGCCCGCTTAAGGTGAACGGATTCCCAATGCGAAGGCTCTGTCAGAAAT
TCGTCATTGCGACCAAGACGAAAATCGACATTTCCGGGGTCAAGATACCGCGTCACATCA
ATGATGCGTATTTCAAGCGCGCGGCCAAGAAGAAGAGCAGGCATGGCGAAGGCGAAATAT
TCGACACCAAGAAAGAGGAGTATGTGGTGTCGGATCAACGCAAAGAAGACCAGAAAACGG
TCGATGCTATGATTCTGCCTATCATAAAAAAGACGGAGTACCTCGAAGGATATCTTGGAT
CCAAATTCCGACTGCAGACTGGCCAGTATCCCCACACGATGGTCTTCTAAT

InterProScan

PANTHER
60S_ribosomal_L6E (IPR000915) - T[1-176] 2.9E-84
SUPERFAMILY
Translation_prot_SH3-like_sf (IPR008991) - T[29-121] 1.08E-23
Gene3D
Rib_L2_dom2 (IPR014722) - T[30-114] 1.7E-9
Pfam
60S_ribosomal_L6E (IPR000915) - T[69-176] 9.2E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL6_HUMAN 69.886 % 247 2.0E-83