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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
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  3. Transcript 'KH2012:KH.L153.95.v1...' > 
  4. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S47.g12486.01.t

Possible name(s)

RDH11; RDH13

Gene model

Harore.CG.MTP2014.S47.g12486

Location

S47 [314,086 / 315,370]

Sequences

Amino acid sequence

Length: 167

>Harore.CG.MTP2014.S47.g12486.01.p
VQKLTGSSNIVLKSLDLTSLQSVRELAKDINGKEKRLDILINNAGIMKVPEGKTKDGFET
HFGVNHLGHFLLTNLLLEKIKENQSGRIITLSSLAHYFGKIHWDDLNVRKNYTGFSAYAQ
SKLMNAIFSVELSRRLRTTAENGGKHLQHEVKKTEEGFGKSVRNILG

Nucleotide sequence

Length: 504

>Harore.CG.MTP2014.S47.g12486.01.t
GTTCAAAAACTTACTGGATCGAGTAATATCGTTTTGAAAAGTCTTGACCTAACATCGTTG
CAATCGGTTAGGGAACTCGCTAAGGATATAAATGGCAAGGAAAAACGTTTGGACATTCTA
ATAAACAATGCAGGCATTATGAAGGTTCCAGAGGGAAAAACTAAGGATGGTTTCGAAACT
CATTTCGGAGTGAATCATTTGGGGCATTTTCTTTTAACAAATCTGTTACTTGAAAAGATA
AAGGAGAACCAGTCCGGGCGTATAATAACACTTTCATCACTTGCTCACTACTTCGGAAAA
ATACACTGGGATGACTTAAATGTAAGGAAAAATTATACCGGGTTCTCGGCCTATGCACAG
AGTAAACTTATGAATGCAATATTTTCCGTAGAGCTGAGTCGGCGTTTGAGAACGACTGCG
GAAAATGGTGGCAAACACTTGCAGCACGAAGTGAAGAAAACGGAAGAAGGCTTTGGGAAA
TCAGTGAGGAATATACTGGGCTGA

InterProScan

PRINTS
SDR_fam (IPR002347) - T[1-9] 1.4E-7 - T[35-46] 4.9E-6 - T[35-46] 1.4E-7 - T[80-96] 1.4E-7 - T[86-94] 4.9E-6 - T[118-137] 4.9E-6
Pfam
SDR_fam (IPR002347) - T[7-100] 5.8E-16
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[8-136] 9.41E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 51.825 % 132 3.49E-38
RDH13_HUMAN 58.73 % 129 8.18E-37
RDH14_HUMAN 49.265 % 126 6.44E-36





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