Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C9.180.v1....' > 
  2. Transcript 'KH2012:KH.C7.52.v3.C...' > 
  3. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S481.g00022.01.t

Possible name(s)

Harore.CG.MTP2014.S481.g00022

Gene model

Harore.CG.MTP2014.S481.g00022

Location

S481 [38,478 / 39,147]

Sequences

Amino acid sequence

Length: 222

>Harore.CG.MTP2014.S481.g00022.01.p
MTSFCSDNAKKIHLTADDIVNLAKIQITNEQYMRSIYMFYCAGKMQKFEGLEGKVFVLKR
VRDIRITVGDMSQEEKEKNVKDYVIPLMEELLQDLRNTKGGIDDYNLVLQGWCMNYIAAC
YNDIGKYQQAAEINESFIKLMSRKLREGAERYHLYGLCYNDAGIAYLNMNQLSRAIEMFN
EALDVYEEVTDWSDRKQKKSNIRITKKNLEIAKDDLSLILIS

Nucleotide sequence

Length: 669

>Harore.CG.MTP2014.S481.g00022.01.t
ATGACATCGTTTTGCAGCGATAACGCGAAGAAGATACACCTGACAGCAGATGACATCGTT
AACCTGGCTAAAATTCAAATTACAAATGAACAATACATGCGTTCCATATACATGTTCTAC
TGCGCTGGTAAAATGCAAAAGTTCGAAGGTTTGGAAGGAAAAGTTTTTGTATTAAAACGG
GTTCGGGACATCAGGATTACTGTTGGAGACATGTCTCAAGAGGAAAAGGAGAAGAATGTG
AAAGATTATGTCATACCTCTCATGGAAGAGCTATTGCAAGATTTGCGTAATACCAAGGGT
GGAATTGATGATTATAATCTTGTACTACAGGGATGGTGCATGAATTATATAGCAGCGTGC
TACAACGACATTGGTAAATATCAACAAGCTGCAGAAATAAATGAAAGTTTCATCAAGCTC
ATGAGTCGCAAGTTGAGGGAAGGAGCTGAGAGGTACCATTTATATGGACTTTGCTATAAT
GATGCAGGAATTGCATATTTGAATATGAATCAGCTCTCAAGAGCTATTGAAATGTTTAAT
GAGGCTTTGGATGTTTACGAGGAGGTAACTGACTGGTCGGATAGGAAACAGAAGAAATCG
AACATTCGTATCACAAAAAAGAATCTTGAGATAGCCAAAGACGATCTGTCGCTAATCTTG
ATTTCATAA

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[15-47] 4.64E-11 - T[109-202] 4.64E-11
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[87-221] 9.0E-12
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[156-189] 9.53
ProSiteProfiles
TPR_repeat (IPR019734) - T[156-189] 9.145

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value