Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S489.g03011.01.t

Possible name(s)

TM6SF1; TM6SF2

Gene model

Harore.CG.MTP2014.S489.g03011

Location

S489 [41,345 / 42,407]

Sequences

Amino acid sequence

Length: 353

>Harore.CG.MTP2014.S489.g03011.01.p
MSGVITVFFLTQIPWLMSTWEFVYPNSINPTVPPAVCTIIFLAALYKFLPRKYTDKDGVV
HKRDMYYYFFCYFAFNSGLTLRFVLHIYGLIDDPFCRLHIAEKEPYFVHSAGRAIILLDC
TFLYVLYLIMIHKQDNKVDDINYRLLWSGSLGYAMFLITFMSIGSYGNERNLEVFILNLT
YMLPYFYIFKVCSEHKPNSSSLKTKTLSSLDLILMLGLLYSILFSVFHGLGALGDPLIEP
YIDNYEPYIKDPAKFGVMHCLVAFFYGMPMQFVLINGLYHHNTDWLPKLSWFYAGMTWQG
TFIYIFAMLSEHTSEQYRVEHAWVVALNALLPIIAFLVALRSNRIQENAVKNK

Nucleotide sequence

Length: 1,062

>Harore.CG.MTP2014.S489.g03011.01.t
ATGTCGGGAGTGATAACCGTGTTCTTTCTAACACAAATACCATGGCTCATGAGTACGTGG
GAATTTGTCTACCCAAACTCGATAAACCCAACGGTCCCGCCTGCAGTTTGCACTATCATC
TTTCTAGCGGCCCTGTACAAGTTTTTACCGAGGAAATATACAGATAAAGATGGCGTTGTC
CACAAAAGAGATATGTATTACTATTTCTTCTGTTATTTTGCCTTCAACTCCGGTTTAACA
TTGCGATTTGTTCTGCATATTTACGGCCTAATAGATGACCCTTTTTGTCGCTTGCACATA
GCTGAAAAAGAACCCTATTTTGTTCATTCTGCAGGAAGAGCCATCATCCTTTTGGACTGC
ACTTTTTTGTATGTTTTATACCTTATCATGATTCACAAACAAGATAATAAGGTTGATGAT
ATAAATTATCGTTTATTGTGGTCTGGTTCACTAGGTTACGCCATGTTTTTGATTACTTTC
ATGTCAATAGGATCATACGGAAATGAACGCAATTTAGAAGTATTTATCCTTAACCTCACT
TACATGTTACCATACTTTTACATATTTAAAGTATGTTCAGAACACAAACCAAATTCAAGC
AGCTTAAAAACAAAAACTCTTAGCTCACTAGACTTAATTCTAATGTTAGGCCTCCTCTAT
TCTATTCTGTTTTCAGTTTTTCATGGCCTGGGTGCACTCGGTGACCCCCTTATCGAACCC
TACATAGATAACTATGAACCTTATATCAAAGACCCTGCAAAATTTGGAGTTATGCATTGT
CTTGTTGCATTTTTCTATGGAATGCCGATGCAGTTTGTTTTGATTAATGGATTGTATCAT
CATAACACTGATTGGTTGCCAAAGCTATCTTGGTTCTATGCTGGAATGACCTGGCAAGGA
ACATTTATATATATTTTTGCAATGTTATCTGAACATACCTCTGAACAGTATCGGGTTGAA
CATGCATGGGTCGTAGCTCTAAATGCCTTGCTTCCAATCATCGCTTTTCTAGTTGCTTTA
CGTTCCAATAGAATTCAAGAAAATGCTGTTAAAAACAAATGA

InterProScan

ProSiteProfiles

EXPERA (IPR033118) - T[210-339] 8.942

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TM6S1_HUMAN	29.73 %	97.8	8.52E-23
TM6S2_HUMAN	29.286 %	82	2.23E-17