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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'KH2012:KH.C2.125.v1....'
  3. Transcript 'Phmamm.CG.MTP2014.S4...'
  4. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S489.g03011.01.t

Possible name(s)

TM6SF1; TM6SF2

Location

S489 [41,345 / 42,407]

Sequences

Amino acid sequence

Length: 353

>Harore.CG.MTP2014.S489.g03011.01.p
MSGVITVFFLTQIPWLMSTWEFVYPNSINPTVPPAVCTIIFLAALYKFLPRKYTDKDGVV
HKRDMYYYFFCYFAFNSGLTLRFVLHIYGLIDDPFCRLHIAEKEPYFVHSAGRAIILLDC
TFLYVLYLIMIHKQDNKVDDINYRLLWSGSLGYAMFLITFMSIGSYGNERNLEVFILNLT
YMLPYFYIFKVCSEHKPNSSSLKTKTLSSLDLILMLGLLYSILFSVFHGLGALGDPLIEP
YIDNYEPYIKDPAKFGVMHCLVAFFYGMPMQFVLINGLYHHNTDWLPKLSWFYAGMTWQG
TFIYIFAMLSEHTSEQYRVEHAWVVALNALLPIIAFLVALRSNRIQENAVKNK

Nucleotide sequence

Length: 1,062

>Harore.CG.MTP2014.S489.g03011.01.t
ATGTCGGGAGTGATAACCGTGTTCTTTCTAACACAAATACCATGGCTCATGAGTACGTGG
GAATTTGTCTACCCAAACTCGATAAACCCAACGGTCCCGCCTGCAGTTTGCACTATCATC
TTTCTAGCGGCCCTGTACAAGTTTTTACCGAGGAAATATACAGATAAAGATGGCGTTGTC
CACAAAAGAGATATGTATTACTATTTCTTCTGTTATTTTGCCTTCAACTCCGGTTTAACA
TTGCGATTTGTTCTGCATATTTACGGCCTAATAGATGACCCTTTTTGTCGCTTGCACATA
GCTGAAAAAGAACCCTATTTTGTTCATTCTGCAGGAAGAGCCATCATCCTTTTGGACTGC
ACTTTTTTGTATGTTTTATACCTTATCATGATTCACAAACAAGATAATAAGGTTGATGAT
ATAAATTATCGTTTATTGTGGTCTGGTTCACTAGGTTACGCCATGTTTTTGATTACTTTC
ATGTCAATAGGATCATACGGAAATGAACGCAATTTAGAAGTATTTATCCTTAACCTCACT
TACATGTTACCATACTTTTACATATTTAAAGTATGTTCAGAACACAAACCAAATTCAAGC
AGCTTAAAAACAAAAACTCTTAGCTCACTAGACTTAATTCTAATGTTAGGCCTCCTCTAT
TCTATTCTGTTTTCAGTTTTTCATGGCCTGGGTGCACTCGGTGACCCCCTTATCGAACCC
TACATAGATAACTATGAACCTTATATCAAAGACCCTGCAAAATTTGGAGTTATGCATTGT
CTTGTTGCATTTTTCTATGGAATGCCGATGCAGTTTGTTTTGATTAATGGATTGTATCAT
CATAACACTGATTGGTTGCCAAAGCTATCTTGGTTCTATGCTGGAATGACCTGGCAAGGA
ACATTTATATATATTTTTGCAATGTTATCTGAACATACCTCTGAACAGTATCGGGTTGAA
CATGCATGGGTCGTAGCTCTAAATGCCTTGCTTCCAATCATCGCTTTTCTAGTTGCTTTA
CGTTCCAATAGAATTCAAGAAAATGCTGTTAAAAACAAATGA

InterProScan

ProSiteProfiles
EXPERA (IPR033118) - T[210-339] 8.942

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TM6S1_HUMAN 29.73 % 97.8 8.52E-23
TM6S2_HUMAN 29.286 % 82 2.23E-17