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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S5...' > 
  2. Transcript 'KH2012:KH.C12.696.v1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R27....' > 
  4. Transcript 'KH2012:KH.C12.696.v1...' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S489.g15191.01.t

Possible name(s)

TM6SF1; TM6SF2

Gene model

Harore.CG.MTP2014.S489.g15191

Location

S489 [42,817 / 43,870]

Sequences

Amino acid sequence

Length: 350

>Harore.CG.MTP2014.S489.g15191.01.p
MKTSGVISIFLLTQISWLTIAWETVFPNVFHPMVPLSICTVFFLMAIYLFFPRTYTTEDG
VECKRDVYYYFFCYFAFNAVVSFRLFLQAFGLIDDTFSRGYLTNNEQYLEDSHGMAFTLW
DSTVFYPIYFIMIYKQDNKIDYTCYGLYWSGALCYSMFILLCTETTIYHIEAFFFNIPYI
LSSYVYIVTVCLNHKPTTSSRIQSPLNLTDVSLLIGLLYCISFSVIHGLAALDHPFIEPY
VETYEPYLKKPFAVSHCLIECFFSVPMFCCMMYGVYHQNIDWLPKLSVFHTGVTTAGTFA
HVYGMLSERTPIQYRVEHAWIVVLNVLVPLVVLLTALHSNKMKSNEVKTK

Nucleotide sequence

Length: 1,053

>Harore.CG.MTP2014.S489.g15191.01.t
ATGAAGACATCAGGAGTGATTTCCATCTTCTTGCTCACCCAAATTTCGTGGCTTACTATT
GCATGGGAAACTGTTTTCCCAAACGTGTTTCACCCAATGGTCCCGCTGAGCATATGCACT
GTCTTCTTTCTCATGGCCATCTATCTATTTTTCCCACGCACCTACACTACTGAAGACGGA
GTTGAGTGCAAAAGAGACGTGTACTATTATTTCTTTTGTTATTTTGCCTTCAATGCCGTT
GTCAGTTTCAGATTATTTCTGCAAGCTTTCGGACTTATAGATGATACTTTTTCTCGAGGT
TACCTCACAAATAATGAACAGTATCTTGAGGACTCGCATGGAATGGCGTTTACACTCTGG
GACTCCACGGTATTCTATCCCATTTATTTCATCATGATTTATAAGCAGGATAATAAGATT
GATTATACCTGTTATGGTCTGTATTGGTCAGGCGCTCTTTGTTATTCCATGTTCATACTA
TTATGTACTGAAACAACTATATACCATATTGAGGCATTCTTCTTCAATATTCCTTATATA
TTGTCGTCCTACGTATACATAGTCACAGTCTGTTTGAACCATAAGCCTACTACAAGCAGT
CGAATCCAGAGTCCTCTCAACCTGACGGATGTTTCTCTCCTAATTGGGCTTCTATACTGC
ATCTCGTTTTCAGTTATTCATGGCCTTGCGGCACTTGACCACCCGTTTATCGAACCCTAT
GTGGAAACCTATGAGCCGTATTTGAAGAAACCCTTTGCAGTCTCTCACTGCCTTATAGAA
TGTTTCTTCAGTGTGCCCATGTTTTGCTGCATGATGTATGGAGTATATCACCAAAACATT
GATTGGTTGCCTAAATTATCAGTTTTTCATACTGGGGTGACCACTGCAGGAACATTTGCA
CATGTCTATGGGATGTTATCAGAACGCACACCGATACAGTACAGAGTAGAACATGCATGG
ATTGTTGTTCTCAATGTTCTTGTTCCTCTAGTTGTTCTTCTGACTGCTCTCCATTCTAAT
AAAATGAAAAGCAATGAAGTTAAAACCAAGTAA

InterProScan

ProSiteProfiles
EXPERA (IPR033118) - T[209-333] 9.97

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TM6S1_HUMAN 28.939 % 106 7.55E-26
TM6S2_HUMAN 30.1 % 100 8.52E-24