- Transcript 'Moocci.CG.ELv1_2.S35...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S48.g06803.01.t
Possible name(s)
SLC6A1; SLC6A5; SLC6A9
Gene model
Location
S48 [273,451 / 277,740]
Amino acid sequence
Length: 399
>Harore.CG.MTP2014.S48.g06803.01.p
MDTENGTARPLVGNGSEENGDENVSSSNSSVDSTVRETWDRKLDFMLSCIGYAVGLGNIW
RFPYLCYKNGGGAFLIPYLIFLLICGIPLFFLELSFGQFGALGPVAIWKIAPLFKGVGYA
MMMISFMVCVYYNVIIAYSLHFIFNSMQSVLPWSTCDNDWNTEFCRNEKLANNATAYLAP
DWTNISCGNGQGWFNTSAKTTMVQSLNATINGSCVNFTTSAQEYFTRRVLRLTDNIDEMG
SIQWELCGFLALAWVIVFICLFKGVKWSGKIVYFTATFPYVVLLILLVRGVMEEGAMLGI
KYYLLPQFDRLFDIKVWIEAAVQIFYSLGAAYGVILSYSSLNNFKNNVYRDAITICCINC
ATSILAGLVVFTVLGSLAFQTDKNITQVVDEGCLLTLII
Nucleotide sequence
Length: 1,200
>Harore.CG.MTP2014.S48.g06803.01.t
ATGGACACCGAAAACGGAACAGCAAGGCCTCTGGTGGGGAACGGCAGCGAAGAGAATGGA
GACGAAAACGTGTCATCAAGTAACAGCTCTGTTGACTCAACGGTTAGAGAAACGTGGGAT
AGGAAACTAGATTTTATGCTATCGTGTATTGGATACGCGGTTGGTCTCGGTAACATCTGG
AGATTTCCTTATCTCTGTTACAAAAACGGAGGAGGCGCTTTCCTAATTCCGTACTTGATA
TTTCTCCTCATTTGTGGTATTCCTCTATTCTTTCTCGAACTATCGTTTGGTCAGTTTGGA
GCACTCGGACCAGTTGCCATATGGAAAATTGCACCTTTATTCAAAGGCGTTGGCTATGCA
ATGATGATGATTTCTTTCATGGTGTGCGTATACTACAACGTTATCATCGCCTACAGTCTC
CATTTTATATTCAATTCGATGCAATCCGTGCTTCCGTGGAGTACCTGCGACAACGACTGG
AATACTGAGTTCTGTCGCAATGAAAAACTTGCTAATAATGCCACTGCTTACTTGGCTCCG
GATTGGACGAACATATCGTGTGGCAACGGGCAAGGATGGTTTAATACGAGTGCAAAAACG
ACTATGGTACAATCGCTGAACGCCACAATCAACGGCTCTTGCGTTAATTTTACAACGTCT
GCCCAGGAGTATTTCACACGACGCGTTCTACGACTTACTGATAATATCGATGAGATGGGA
AGTATTCAATGGGAGCTCTGTGGTTTCTTGGCCTTGGCATGGGTCATCGTATTTATATGC
TTATTCAAAGGAGTGAAATGGTCCGGAAAGATCGTTTACTTCACGGCAACTTTCCCTTAC
GTCGTCCTCTTAATTTTGCTCGTTCGGGGCGTTATGGAGGAAGGTGCGATGCTTGGTATA
AAATATTATCTACTGCCCCAGTTCGACCGACTTTTTGACATCAAGGTATGGATCGAAGCA
GCGGTTCAAATATTCTATTCTCTTGGCGCTGCCTACGGTGTTATTCTGTCCTATTCTTCG
CTGAATAATTTCAAAAACAACGTCTATAGGGATGCGATTACCATATGTTGTATAAACTGC
GCAACGAGCATACTGGCTGGCTTGGTTGTCTTCACTGTACTCGGATCGTTAGCGTTCCAG
ACTGACAAAAACATTACACAAGTCGTCGATGAAGGTTGTCTGCTTACATTGATTATATAA
| PANTHER |
Na/ntran_symport (IPR000175) - T[35-398] 4.4E-142 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[35-399] 66.092 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[36-165] 2.88E-118 - T[219-395] 2.88E-118 |
| Pfam |
Na/ntran_symport (IPR000175) - T[36-398] 9.0E-135 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[44-65] 4.2E-55 - T[73-92] 4.2E-55 - T[116-142] 4.2E-55 - T[271-288] 4.2E-55 - T[353-373] 4.2E-55 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[60-74] . - T[142-162] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A7_HUMAN | 48.953 % | 360 | 1.24E-119 |
| SC6A5_HUMAN | 46.787 % | 353 | 3.17E-115 |
| SC6A9_HUMAN | 46.859 % | 363 | 4.09E-120 |