- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S48.g09619.01.t
Possible name(s)
H3F3A; HIST2H3A; HIST2H3D
Gene model
Location
S48 [60,217 / 61,334]
Amino acid sequence
Length: 203
>Harore.CG.MTP2014.S48.g09619.01.p
MAQSTRILLQLLRVLLLLRVRESCSNGSMYLSTDQCFLLLKMARTKQTARKSTGGKAPRK
QLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF
KTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRGVIGDESSNLGEKLKIEVVQPK
ALAPLLTENHLIDVLYVFMMQLA
Nucleotide sequence
Length: 612
>Harore.CG.MTP2014.S48.g09619.01.t
ATGGCGCAATCCACGCGAATTTTACTACAGTTGTTGCGGGTTTTGTTATTATTGAGAGTC
AGAGAAAGCTGTAGTAATGGTAGCATGTATCTAAGCACTGATCAGTGTTTCCTACTCCTG
AAAATGGCCCGTACTAAACAAACAGCAAGAAAATCTACTGGAGGCAAGGCTCCGAGGAAA
CAACTGGCAACAAAGGCAGCAAGAAAAAGTGCACCGTCTACTGGTGGAGTGAAAAAACCC
CATAGATATAGGCCTGGAACTGTTGCACTCCGTGAAATTCGTAGGTACCAGAAATCTACA
GAATTGCTGATCCGCAAACTGCCTTTTCAACGTCTCGTACGTGAAATTGCTCAGGATTTC
AAGACTGATTTAAGGTTTCAAAGTGCTGCAATAGGAGCTCTTCAGGAAGCAAGCGAAGCC
TATCTAGTTGGATTGTTTGAAGATACTAACTTGTGCGCGATTCATGCAAAGCGAGGCGTA
ATTGGTGATGAATCTTCAAATTTAGGAGAAAAACTAAAGATAGAGGTGGTTCAGCCAAAA
GCTTTGGCGCCATTGCTAACAGAAAATCACCTCATTGATGTTTTATATGTATTTATGATG
CAGCTAGCATAA
| Pfam |
Histone_H2A/H2B/H3 (IPR007125) - T[42-159] 1.6E-42 |
| PANTHER |
Histone_H3/CENP-A (IPR000164) - T[42-176] 1.0E-79 |
| Gene3D |
Histone-fold (IPR009072) - T[43-175] 2.6E-67 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[43-158] 2.19E-46 |
| PRINTS |
Histone_H3/CENP-A (IPR000164) - T[44-58] 2.2E-71 - T[58-72] 2.2E-71 - T[75-96] 2.2E-71 - T[99-116] 2.2E-71 - T[121-139] 2.2E-71 - T[139-155] 2.2E-71 - T[155-176] 2.2E-71 |
| ProSitePatterns |
Histone_H3/CENP-A (IPR000164) - T[56-62] . - T[108-116] . |
| SMART |
Histone_H3/CENP-A (IPR000164) - T[75-177] 4.6E-53 |