- Region 'REG00000202' >
- Transcript 'KH2012:KH.C3.330.v3....' >
- Transcript 'KH2012:KH.C3.330.v2....' >
- Transcript 'KH2012:KH.C11.408.v1...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S492.g15253.01.t
Possible name(s)
KHDRBS2; QKI; SF1
Gene model
Location
S492 [35,900 / 43,331]
Amino acid sequence
Length: 704
>Harore.CG.MTP2014.S492.g15253.01.p
MSRKSFTGANAVPLGPRNPAIGAKRTFSAEPPPASYNQPSPFPIKHEENKVSSNAAAALR
AAQAAAANLAKLQKKVAELTPIKQEEIPDESRGRPRKKRSRWGTPEVKTNIPGIPAIIPA
NLTKDQQKAYIVQLQIEDLTRKLKSGDLGISPNPEDRSPSPEPIYNNEGKRLNTREYRTR
KKLEEDRHKLIQDMMRLNENYKAPMDYKPPVQRISEQIVIPSDLNPSINFVGLLIGPRGN
TLKKIEKESQCKIMIRGKGSVKEGKIGRKDGMPLPGEDEPLHALVTGMTIESVQKAVKEI
HAIIKQGIEQPEGQNDLRKLQLMELARLNGTLRDDALPREREWLKPENQNITNTTVCTKC
GGRGHLVQDCLSQAPSVGLQQEANSADGEPVNEVDKAKMDSEYMSLMAELGEGPVSSGGN
SAGNKDNSNQQFGGDQFSGPRAPWMGQRGPGYGGPMGYNGPPGNYNPPNMMGGPNVRPPP
WMRGDNRGRGGNYGPRGGGRGSGHQGYGYQGYPQGNMQWMGQYDGGMGYGNMDGSNMGMG
GHMGNMMNPPPPPPNSAPQQPPLPPGSSGGPSSNWQQQSWGANSSDGDGQEPPGESKSTE
SSNNNEYEGGNGMQNNQMGGYGNMMGYGMWGGMGNMNSGGMGQPPMPSGPGPVPPPPPSN
GNESGQSGNANQQWGGNMEYNNMMGMGMMGFGMPPAPPPPPPST
Nucleotide sequence
Length: 2,115
>Harore.CG.MTP2014.S492.g15253.01.t
ATGTCACGGAAGTCCTTCACAGGGGCGAACGCCGTTCCCCTCGGACCGCGGAATCCCGCT
ATAGGGGCCAAACGAACGTTTTCTGCCGAACCCCCACCGGCCAGCTACAATCAACCTAGT
CCGTTCCCTATAAAGCATGAAGAAAATAAAGTGAGTTCGAATGCAGCAGCTGCCTTACGT
GCAGCTCAAGCAGCAGCTGCTAATCTGGCGAAACTACAGAAGAAAGTAGCAGAATTAACT
CCAATAAAACAAGAAGAAATCCCGGACGAAAGCCGCGGTCGTCCAAGGAAGAAACGAAGT
CGATGGGGCACGCCTGAGGTGAAGACGAATATCCCTGGAATTCCTGCGATCATTCCCGCT
AATCTGACAAAGGATCAGCAAAAAGCCTATATAGTGCAGCTCCAGATCGAAGATTTGACA
AGAAAATTGAAATCAGGCGACCTAGGCATCTCGCCCAACCCAGAAGACAGATCACCTTCT
CCAGAACCGATCTATAACAACGAGGGTAAGAGGTTGAACACGAGAGAATACAGAACCAGG
AAGAAACTAGAAGAAGACAGACATAAGCTTATCCAAGATATGATGAGATTGAATGAAAAT
TACAAAGCTCCGATGGACTACAAACCACCGGTTCAAAGAATAAGCGAACAAATTGTGATT
CCGTCTGATTTGAATCCAAGTATTAATTTTGTTGGATTGCTGATCGGACCAAGAGGAAAT
ACTTTGAAAAAAATAGAAAAAGAATCCCAATGTAAGATCATGATTCGAGGGAAAGGTTCT
GTGAAAGAAGGGAAGATTGGAAGAAAGGATGGAATGCCGCTACCTGGCGAAGACGAACCA
TTACATGCTCTCGTTACTGGAATGACAATCGAGAGTGTCCAGAAGGCAGTGAAAGAAATT
CATGCAATTATTAAACAAGGAATTGAGCAGCCGGAAGGGCAAAATGATTTACGGAAATTG
CAACTGATGGAATTGGCGAGACTGAATGGTACACTACGAGATGATGCTTTGCCAAGAGAA
CGTGAGTGGCTTAAACCTGAGAATCAAAATATCACTAACACCACCGTGTGTACAAAATGT
GGAGGACGTGGACATCTCGTTCAGGATTGCTTGTCGCAGGCTCCCAGTGTCGGTCTTCAA
CAGGAAGCAAATTCTGCCGACGGTGAGCCTGTGAATGAAGTTGATAAAGCAAAAATGGAC
AGCGAGTACATGTCACTCATGGCTGAACTTGGTGAAGGTCCAGTGTCATCTGGTGGTAAC
AGCGCAGGGAATAAAGATAACAGCAATCAACAATTTGGTGGAGATCAGTTCAGTGGACCC
AGGGCACCGTGGATGGGACAAAGAGGACCTGGATATGGAGGTCCCATGGGATACAATGGA
CCGCCTGGAAATTATAATCCGCCGAATATGATGGGCGGCCCCAATGTAAGACCCCCACCT
TGGATGAGAGGAGATAATCGTGGTAGAGGGGGTAATTATGGTCCCAGAGGAGGAGGTAGG
GGTTCTGGACACCAAGGTTATGGTTATCAAGGATATCCACAAGGTAATATGCAATGGATG
GGTCAGTATGATGGTGGTATGGGTTATGGAAACATGGATGGATCTAACATGGGTATGGGT
GGTCACATGGGTAATATGATGAATCCTCCACCTCCTCCACCAAATTCTGCTCCCCAACAA
CCCCCTCTTCCTCCTGGTTCGTCAGGTGGCCCGTCATCCAACTGGCAACAGCAGTCTTGG
GGAGCAAACTCTTCTGATGGAGATGGACAGGAGCCACCAGGAGAAAGTAAATCGACTGAG
TCATCAAATAACAATGAATATGAAGGTGGCAACGGAATGCAGAATAATCAAATGGGAGGA
TATGGCAATATGATGGGTTACGGTATGTGGGGAGGAATGGGTAACATGAATTCAGGAGGA
ATGGGTCAACCCCCGATGCCATCAGGACCCGGTCCGGTTCCTCCTCCGCCACCAAGCAAC
GGGAACGAGTCCGGTCAATCTGGGAATGCCAACCAGCAGTGGGGCGGCAATATGGAATAT
AACAATATGATGGGTATGGGCATGATGGGGTTCGGAATGCCCCCTGCCCCTCCTCCACCA
CCCCCATCAACGTGA
| PANTHER |
BBP/SF1 (IPR031150) - T[44-569] 2.8E-148 - T[553-702] 2.8E-148 |
| Pfam |
SF1-HH (IPR032570) - T[99-208] 6.0E-40 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[153-338] 7.4E-52 |
| SMART |
KH_dom (IPR004087) - T[212-305] 6.5E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[214-332] 1.05E-24 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[217-301] 1.3E-8 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[357-370] 9.109 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 66.163 % | 437 | 4.49E-145 |
| QKI_HUMAN | 35.165 % | 92 | 3.85E-20 |