Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S495.g10820.01.t

Possible name(s)

YRDC

Gene model

Harore.CG.MTP2014.S495.g10820

Location

S495 [54,236 / 55,813]

Sequences

Amino acid sequence

Length: 299

>Harore.CG.MTP2014.S495.g10820.01.p
MISVLRKIFTLKISREFGEAKQMISTAQPFRYKSTIIGENRREALRPQMSDAKGQESDPK
PKYYKLKKNCENSDVIEDLVKILQRGGVVGIPTDTLYGIACLAQSTEAVDKIYSIKGRDP
KKPIAICVGEVYDVAQWGKLPSNLGQTGADRGVKKNSVELLKDILPGPVTIVIDRTPSLN
TRLNPETNMVGVRVPQHEFVRNLASRLMEPLALTSANLSSTRSSLCVKDFENLHHLLDAV
VDGGPIGEEGALGGAGDARLGSTVTRIMPDGKSFQVLRAGCAYQQTVDVFVKSWGLTQI

Nucleotide sequence

Length: 969

>Harore.CG.MTP2014.S495.g10820.01.t
ATGCTGAAAAAAAGGCAATATGAGCCGCCGCCGAAATTGTGAACAACTTATTTGTTATCT
GTAGATTTTATGATATCTGTCTTGAGAAAAATTTTCACTTTGAAAATCTCAAGAGAATTT
GGTGAAGCGAAACAAATGATCAGCACGGCTCAACCATTTCGTTACAAGTCGACAATAATT
GGCGAGAATCGGAGGGAAGCCCTGCGGCCACAGATGTCAGATGCCAAAGGTCAAGAGTCT
GATCCGAAGCCGAAATATTACAAGTTGAAAAAGAACTGTGAAAATTCTGATGTCATAGAG
GATCTCGTTAAAATCTTACAACGCGGTGGAGTTGTTGGGATACCGACCGACACCCTTTAC
GGCATCGCTTGTCTCGCTCAAAGCACAGAGGCGGTAGACAAAATCTATTCTATCAAAGGT
CGTGACCCTAAAAAGCCAATCGCTATATGTGTGGGTGAGGTTTATGACGTTGCACAGTGG
GGCAAGCTTCCAAGCAACCTGGGACAGACGGGGGCCGACAGAGGAGTTAAAAAAAATTCC
GTAGAACTCCTGAAGGACATTCTCCCAGGTCCTGTAACGATTGTGATCGACCGAACCCCG
TCTCTGAACACCCGTCTCAACCCAGAGACGAATATGGTGGGGGTAAGGGTCCCCCAGCAC
GAGTTTGTACGAAATCTAGCAAGTCGTTTGATGGAACCCCTCGCACTCACATCGGCCAAC
CTTTCCTCCACTAGAAGTTCTCTTTGTGTCAAGGATTTTGAGAATCTTCATCATTTGCTG
GATGCTGTTGTAGATGGAGGACCTATTGGAGAAGAGGGAGCTCTTGGAGGAGCTGGGGAT
GCAAGACTCGGATCAACGGTCACCAGGATAATGCCGGATGGTAAATCATTCCAGGTGTTA
CGTGCGGGGTGTGCATACCAACAAACTGTTGATGTGTTTGTGAAAAGCTGGGGTTTGACA
CAAATATAA

InterProScan

TIGRFAM	YrdC-like_dom (IPR006070) - T[70-247] 6.4E-38
SUPERFAMILY	DHBP_synth_RibB-like_a/b_dom (IPR017945) - T[71-286] 9.16E-39
ProSiteProfiles	YrdC-like_dom (IPR006070) - T[73-282] 22.662
Pfam	YrdC-like_dom (IPR006070) - T[82-279] 3.3E-38

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
YRDC_HUMAN	42.857 %	164	6.5E-49