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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.42.v1.A...' > 
  2. Transcript 'KH2012:KH.C5.641.v1....' > 
  3. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S50.g14944.01.t

Possible name(s)

Harore.CG.MTP2014.S50.g14944

Gene model

Harore.CG.MTP2014.S50.g14944

Location

S50 [262,521 / 263,141]

Sequences

Amino acid sequence

Length: 156

>Harore.CG.MTP2014.S50.g14944.01.p
MGEGCANGTVRGEVKFFNDEKGFGFITPDDNSQERRDIFVHHTSIHGQGAGFRTLQSGDR
VQSSKYEATGPTRTQFDSFLPVLGFYLFETNTYSKFNICKFIQAARCQGAKYLRCYYFCH
QCYTHERFVCFAHFLNSIILLLDEAYHFSVYIRSMA

Nucleotide sequence

Length: 471

>Harore.CG.MTP2014.S50.g14944.01.t
ATGGGAGAGGGGTGCGCGAATGGAACAGTGAGAGGAGAGGTCAAGTTCTTCAATGACGAG
AAGGGATTTGGATTCATAACTCCTGATGACAATTCTCAAGAAAGAAGAGATATATTTGTC
CATCACACCTCGATCCATGGGCAAGGAGCCGGTTTTCGTACCTTGCAGTCGGGTGACAGA
GTCCAGTCGAGTAAATATGAAGCGACAGGGCCAACGCGGACTCAGTTTGACAGCTTTTTA
CCCGTGTTAGGTTTTTATTTGTTTGAAACTAATACTTATTCTAAATTTAACATATGTAAA
TTCATACAAGCTGCTAGGTGCCAAGGTGCAAAATATCTAAGGTGCTATTATTTTTGTCAT
CAGTGTTACACTCATGAAAGATTTGTGTGCTTTGCCCATTTTTTAAATTCAATCATTCTG
CTTCTAGACGAAGCATATCATTTCAGTGTTTATATACGATCCATGGCTTAA

InterProScan

CDD
CSP_DNA-bd (IPR002059) - T[10-61] 2.73272E-18
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[10-63] 8.36E-12
Pfam
CSP_DNA-bd (IPR002059) - T[11-62] 1.6E-15
SMART
CSD (IPR011129) - T[11-74] 2.1E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value