- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C7.526.v3....' >
- Transcript 'Moocul.CG.ELv1_2.S91...' >
- Transcript 'Mooccu.CG.ELv1_2.S36...' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S52.g02178.01.t
Possible name(s)
SEMA6A; SEMA6C; SEMA6D
Gene model
Location
S52 [183,538 / 195,098]
Amino acid sequence
Length: 1,690
>Harore.CG.MTP2014.S52.g02178.01.p
MLTFCKQANRFKSLKQELNFTVRMLTAYVALANEMKIDSLVRVVVCKDTDIKLYQCRESV
KVFEFEIRFRYRIRNLHVGSLKANRVASQILFGFFFVLRNKLVKGRNLLFTWSAFIPGQI
ISCKHEAEDNTEQLNLLIKRCIVVSVKNTTNLNLRRRRSLCIINVMILPISLCLCFHCKG
RKCYNGVIFGFNNKHNQRTSTTQGTMDSSKTLHTIQFLFFVSVFGLNTCYALPEDWKPRA
TLNFQQTSLFKIFNGKGLQGQSNKLTDLQEVKIINDDYALISSRNHIYVVDLKTISDEDN
DVKFSQVIQWLPENVTTCTLKADGKRRCENYIRVLASMSGNNYLICGTNALKPKCREYKW
NGTQFTSYIGGNRYTDTNKCPLDDEPSLAYVYSGGNLYTATRINYRQDPTVRRTPVDGRM
PQADFEPNMSSGSQVVRDEPLPHLSTDNNEASLLNDPVFVAAMETSEKVFVFFREIATES
FGNGDISFSRVAQVCKNDKGGSKNYRAHKWTSYFKARLNCSAPGSKPFYFNELRHLSREV
VINGVTTVFAVMTTPEDSIWGSAVCAYTVPAIEKAMTGDFRKHSTFDAASECWSKTGQKP
PYGLHPTVCPSQYEDTRSLPNNDLQFRRNHPLMAASVQPITDIPLFMRTQSRYIFSAIDV
ELEPSVEDSSQLISILYIGTNDGHLLTVVPYPYDTDDRYDNRKKRGDGAFVQELEVYNPR
ECASPSGKSSPTSEGSVPIEGSENADDAKRVVSITAVKGRDLLLVAFRNCIISVPKKLCA
LHNCRKKCVQSGNPYCGWLDGSCVIVTEENKNKIEQDLFAERTDLPECTGFTDFETSPTS
PYVKVNECSAASSFAVPLSISMSVCFFVVLIVFLVVMKCQHRLCGSCRRSRRNKALASLD
QDFNTANNSSNKRPIYKGPRSASITVSNSFATRRPVIAKPSNASSYVGYNLEETSESSNA
LDTRDPPSRNMYASVASVTNSFTSDSHHGNSVTSLEDVERRKFHGVNIVEDVRPSSDRVV
DNQSLGSETNLNNNNTKKTIGVAIAMTHADSPLRRRKQSFGDVVDRPSTPTTTRIRMGSL
SGTCAVGRINSPNHTWKPQHPRIVTNPNFMAVSPMPNNVLRSVSQDSESKSVNVDSDEDR
RKSCGGLPKPPVSGLAGRCLSSKEKMVSGYSEITNAQNHIFGRQSNSPEPEYENTRMLPQ
NSEHIKPSPPTPPPANLKPGRKLSSFTTSHFNTSWFPANCSRSYKNGMISNLEEIKALKD
TQDIRSSSSSSGVMSSSSSASGGNICPENYPETSEKNRAGRRKGQACRKDMIVAKGLLSA
QVMLDQHPKKNHLSDDGYGSGTVSNHLKKRDCKDIPEYQNIPGSGTVGKQRNRAASADYL
GKDSSSDEECIIKELGEINWDRQKKDSKKKSSLSSNETSRKKKAIKKGKKNADKRGLVVD
LSSPSDSDNVFYDVPPISMIDFDTEDGGRDAFVDECSWQRENNISCRQALDDSFVETCRE
DSVNNSPSSKYQYAFHTMRPPGRMRQKLPRLRCGEKECDATLIPSLFRQLPLQVVLSGNG
RCFRHFLLCFQIEIIFFEFHSVFIFILMRSVPCYLLKMTVWLERRKNQPTVLACSVLFVP
LLCFSYCQLHQNRSLRICDGVLLDLRSRYCCLFLQIVILQKYICRFHDAWSSFAFYSPGY
CPGTSDIVGS
Nucleotide sequence
Length: 5,293
>Harore.CG.MTP2014.S52.g02178.01.t
ATGCTGACGTTTTGTAAGCAAGCCAATCGATTCAAGTCCCTGAAGCAGGAGCTAAATTTC
ACGGTGCGAATGTTAACTGCATATGTTGCCTTAGCAAACGAGATGAAGATAGATAGTTTG
GTCAGGGTAGTTGTTTGTAAAGATACGGATATAAAACTGTATCAGTGTCGAGAATCTGTC
AAGGTATTTGAGTTTGAGATTAGATTCAGATATAGGATAAGAAATCTACATGTTGGATCC
TTAAAGGCCAACAGAGTAGCTTCACAAATTCTTTTTGGATTCTTCTTTGTTTTACGTAAT
AAACTGGTAAAAGGCAGGAATCTATTGTTTACTTGGAGCGCATTCATTCCAGGACAAATA
ATTAGCTGTAAGCACGAAGCAGAGGATAATACCGAACAACTAAACCTGCTGATAAAACGT
TGTATAGTGGTGAGCGTGAAGAATACAACCAATTTGAACCTTAGGAGAAGAAGGAGTTTG
TGTATAATAAATGTTATGATACTGCCTATTTCTTTGTGTTTATGTTTTCATTGCAAAGGA
AGGAAGTGCTACAATGGAGTAATATTTGGCTTTAATAACAAGCATAATCAAAGAACAAGT
ACAACGCAGGGAACCATGGATTCCTCAAAGACACTGCACACCATCCAGTTTCTGTTTTTT
GTTTCTGTATTTGGGTTAAACACCTGCTACGCACTCCCGGAAGACTGGAAGCCACGAGCG
ACATTAAATTTTCAACAAACTTCACTGTTCAAAATATTCAACGGCAAGGGCTTGCAGGGA
CAATCTAATAAGCTGACTGATCTTCAAGAAGTGAAAATAATCAATGATGATTATGCATTA
ATATCATCAAGGAATCACATCTACGTTGTGGATTTGAAAACTATTTCTGATGAGGACAAT
GACGTCAAATTCAGTCAGGTCATTCAGTGGTTGCCTGAAAATGTTACTACTTGTACACTG
AAGGCCGATGGTAAAAGACGATGTGAGAATTATATTCGAGTTCTTGCCAGCATGTCCGGA
AACAACTATCTGATTTGCGGAACAAATGCATTGAAACCTAAATGTAGGGAATATAAGTGG
AATGGAACGCAGTTTACGAGCTATATTGGTGGAAACAGATATACCGATACAAACAAATGC
CCGTTAGACGACGAACCTTCTCTTGCATACGTCTACAGCGGAGGAAATCTTTACACCGCA
ACGAGGATAAATTATCGTCAAGATCCAACTGTTCGCCGTACGCCCGTCGACGGTAGAATG
CCCCAGGCCGATTTTGAACCGAATATGTCTTCCGGTTCGCAGGTGGTTCGCGATGAACCG
CTGCCCCATCTTTCGACTGATAACAACGAGGCGTCGCTGCTCAACGACCCGGTCTTCGTT
GCGGCAATGGAAACCAGCGAGAAGGTATTCGTGTTTTTCCGAGAAATCGCTACGGAAAGC
TTCGGAAATGGAGACATTTCATTTTCGCGGGTCGCCCAAGTATGTAAAAACGACAAGGGA
GGGAGCAAGAATTACCGTGCTCACAAATGGACCTCGTATTTTAAAGCACGACTCAATTGC
TCGGCACCTGGATCAAAGCCATTTTACTTCAACGAATTACGTCATCTTAGCCGAGAAGTC
GTCATCAATGGCGTAACTACCGTGTTTGCTGTCATGACAACACCAGAGGATTCGATTTGG
GGTTCTGCAGTTTGTGCCTACACTGTTCCCGCAATAGAAAAAGCCATGACAGGTGACTTT
CGTAAACATTCGACTTTCGATGCAGCGTCGGAATGCTGGAGTAAAACTGGCCAAAAGCCA
CCTTACGGGTTGCATCCTACAGTGTGTCCATCGCAGTATGAAGACACAAGATCGCTTCCA
AACAACGATCTGCAATTTCGCCGTAACCATCCACTGATGGCAGCCTCCGTACAACCAATA
ACAGATATACCGTTATTCATGCGCACACAATCTCGCTATATATTCTCTGCAATAGATGTC
GAACTGGAACCGAGTGTGGAAGACAGCAGCCAGTTAATTAGTATTTTGTATATCGGTACC
AACGACGGTCATCTTCTGACAGTCGTCCCTTACCCGTACGACACTGACGACCGTTACGAC
AACAGAAAAAAGCGCGGCGATGGAGCATTCGTGCAAGAATTGGAGGTATACAATCCGCGA
GAATGTGCGTCGCCATCCGGAAAGAGTTCTCCCACAAGCGAAGGCAGTGTTCCGATCGAG
GGAAGCGAGAACGCCGATGATGCGAAACGTGTTGTCAGTATCACTGCAGTAAAAGGCCGT
GACCTTCTGCTGGTTGCTTTTCGCAACTGCATTATATCTGTTCCGAAGAAGTTGTGCGCT
CTACATAACTGCAGAAAGAAATGCGTACAGTCTGGCAACCCCTACTGCGGATGGTTAGAC
GGTTCGTGCGTTATTGTGACTGAAGAAAACAAGAACAAAATCGAGCAAGATTTGTTTGCT
GAGCGCACAGATCTTCCCGAATGTACTGGCTTTACAGATTTTGAAACCTCCCCTACCTCG
CCTTACGTAAAAGTAAACGAATGCTCGGCGGCCTCCTCCTTTGCGGTCCCTTTGTCGATT
TCTATGAGCGTTTGCTTTTTCGTAGTGCTTATCGTTTTCCTCGTCGTCATGAAGTGTCAG
CACCGGCTTTGTGGAAGTTGCCGAAGGAGTAGAAGAAACAAGGCACTTGCAAGTCTCGAT
CAAGATTTTAACACGGCTAACAACTCTTCGAATAAGCGTCCGATATACAAGGGTCCCCGC
TCAGCTAGCATTACGGTTTCGAATTCGTTTGCTACGCGCCGTCCCGTTATAGCCAAGCCT
TCGAACGCTTCTTCATACGTCGGTTACAATCTTGAAGAAACGAGTGAATCATCTAATGCT
CTGGACACTAGAGATCCGCCATCGCGTAACATGTACGCCTCGGTCGCCTCCGTCACGAAC
TCTTTCACGAGCGATTCTCACCATGGCAATAGCGTAACGTCACTAGAAGATGTCGAGCGC
CGAAAATTCCACGGAGTCAATATTGTGGAAGACGTTCGGCCGAGCAGTGATCGTGTTGTC
GACAACCAGTCCCTTGGAAGCGAAACAAATTTGAACAATAACAATACCAAGAAAACTATA
GGGGTCGCCATCGCGATGACACATGCTGATTCTCCGTTGAGAAGACGAAAGCAGTCGTTT
GGCGATGTGGTCGATCGACCTTCTACGCCGACTACGACGAGGATACGCATGGGTTCTCTG
TCAGGAACTTGTGCGGTGGGAAGAATTAACAGCCCGAACCATACCTGGAAGCCGCAACAT
CCCAGAATCGTAACGAATCCCAACTTCATGGCCGTCTCTCCCATGCCCAACAATGTATTG
AGATCCGTGTCACAGGATTCTGAGTCGAAGTCCGTTAATGTTGACAGTGATGAAGACAGA
CGTAAAAGTTGTGGAGGTTTGCCAAAGCCTCCTGTCAGTGGTTTAGCAGGAAGATGTCTG
TCCTCAAAAGAAAAGATGGTCTCGGGCTATTCTGAGATAACGAATGCACAAAATCACATT
TTCGGCAGACAGTCGAACAGTCCGGAACCGGAGTACGAGAATACTCGGATGCTTCCACAA
AACAGTGAACACATCAAGCCCAGTCCACCTACTCCCCCTCCTGCCAATCTAAAACCTGGT
CGGAAGCTGTCATCTTTCACGACCTCTCATTTCAATACTTCTTGGTTCCCTGCAAATTGT
TCCAGATCGTACAAAAACGGGATGATTAGCAATCTGGAGGAGATCAAAGCGCTCAAGGAT
ACTCAAGACATCAGATCTTCGTCCTCCAGCAGCGGTGTGATGAGCTCTTCTTCCTCTGCC
TCTGGAGGCAATATTTGCCCGGAAAATTATCCAGAAACTAGTGAAAAAAATAGAGCGGGA
AGAAGGAAAGGACAGGCGTGTAGAAAGGACATGATCGTTGCAAAGGGCCTTCTTTCTGCT
CAAGTCATGTTGGATCAGCATCCTAAAAAAAATCATCTTAGTGATGACGGATACGGCAGT
GGCACGGTTTCCAACCATTTGAAGAAAAGAGATTGTAAAGATATTCCCGAATATCAAAAT
ATTCCAGGTTCAGGAACCGTTGGAAAGCAGAGGAATAGAGCTGCTTCTGCTGACTACTTG
GGCAAAGATTCTTCCTCCGACGAGGAATGCATCATCAAAGAACTTGGAGAAATCAACTGG
GATCGCCAAAAGAAAGATTCGAAGAAAAAAAGCAGTCTCTCTTCTAACGAAACCAGTCGC
AAGAAGAAAGCGATCAAAAAGGGCAAAAAGAACGCTGACAAACGCGGGCTAGTTGTTGAT
CTATCGTCACCTTCCGATAGCGACAACGTATTCTACGACGTGCCTCCAATTAGTATGATA
GATTTCGATACTGAAGATGGCGGTCGAGATGCATTTGTAGATGAGTGTAGTTGGCAAAGG
GAAAACAACATCAGCTGTCGACAAGCCCTGGACGACAGTTTTGTAGAAACTTGCCGTGAG
GATTCTGTTAATAATTCACCGTCGTCCAAGTATCAGTACGCCTTTCACACGATGAGACCA
CCCGGCCGCATGCGCCAAAAACTGCCCAGACTACGTTGCGGGGAGAAGGAATGCGATGCA
ACATTAATTCCTTCCTTATTTCGCCAACTTCCCCTCCAAGTGGTACTCAGTGGGAATGGA
AGATGTTTTAGACATTTCTTACTTTGTTTCCAAATCGAGATCATTTTTTTTGAGTTCCAT
TCTGTCTTTATTTTTATTCTTATGCGATCAGTACCATGCTATCTGCTAAAAATGACAGTG
TGGTTAGAAAGGCGTAAAAATCAGCCAACTGTACTCGCTTGTTCTGTATTATTTGTGCCG
TTGCTTTGCTTCTCCTACTGCCAGTTGCACCAAAACCGTAGTTTGCGCATCTGTGATGGT
GTTTTATTAGATTTGCGTTCAAGGTACTGTTGCTTGTTTTTACAAATCGTTATTTTACAG
AAATATATTTGTCGTTTCCATGATGCTTGGAGTTCTTTTGCCTTCTATTCCCCCGGATAT
TGTCCTGGAACAAGTGATATCGTTGGGTCGTGATGTGGCCCAATTCTAAATCGTCCGTAA
CGTCATTCTTTATTCAGAATATTAAAATATGTGACTCGCTCTATCCAAAATGATGACGCC
ACCATCTTCATTTCTACGAATTCCTAACTTCATGGGATATCTGGAAAAATCGATTTCTGT
GCAATATTCCTCTCTTACGTACAGCATTACTCTGTATTCTACGTATACTAACGTGGAACC
CGTTCGCCATCTA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[229-775] 1.4E-98 |
| ProSiteProfiles |
Semap_dom (IPR001627) - T[239-776] 68.841 |
| SMART |
Semap_dom (IPR001627) - T[269-733] 5.5E-57 |
| SUPERFAMILY |
Semap_dom_sf (IPR036352) - T[276-719] 1.14E-83 - T[748-781] 1.14E-83 |
| Pfam |
Semap_dom (IPR001627) - T[280-693] 3.4E-79 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEM6A_HUMAN | 30.556 % | 284 | 5.07E-79 |
| SEM6D_HUMAN | 30.064 % | 281 | 8.27E-78 |
| SEM6C_HUMAN | 28.767 % | 277 | 1.87E-77 |