Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R167...' > 
  2. Clone 'citb042a02' > 
  3. Transcript 'KH2012:KH.C8.506.v1....' > 
  4. Molecular Tool 'Ci-Bra -3.5Kb/Ci-Su(H)DBD' > 
  5. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S535.g03037.01.t

Possible name(s)

SDAD1

Gene model

Harore.CG.MTP2014.S535.g03037

Location

S535 [9,554 / 15,473]

Sequences

Amino acid sequence

Length: 659

>Harore.CG.MTP2014.S535.g03037.01.p
MGRTNQLPDNLPQLQNLIKRDPVSYRDEFEQQFRRYQSHMNVFLIQPQEESKELQELTTF
IAQVSHCYPTLVSDFPQQLKEVLQKHGPSLNHDMRMNFCKCLILLRNKNLIPPLSLFELF
FELFRCQDKLLRKTLYNFIVQDVKNLNQHHKNNKLNRSLQNFMYSMLSDNNSTAAKMSLD
VMSELYHRQIWNDAKTVNVMSTACFSQIPKVSASALRFFLGQDAIKNKIEGESDSDDDGP
TARDVITKYAVNKKTTRSKKKRNKALRVLHKHKKKMKNSPNSFSALQLLNDPQGFGERLY
KVLSKSNERYEVRLMMMTLLSRLIGIHQLFIFSYYTFIQKYFQPHQRDVTKILLCCAQAS
HDLVPPEIIQPLIRTIVDNFVTERNSSEVIAVGLNAVREICARCPLAMNPDLLQDLVQYK
TYRNKAVMMASKSLIQLFRAINPSLLHKKDRGKPTEAMKELEIAEYGQVITKDFVAGTEI
LNEEVEENNDGEDGWESCSNDSDDSDGSWQDVIHSDDEAEVANDMKLSKEEQIVKAQNVS
QMRLLTQEEFQKLRANQAMKEVEPASSKKVGGGKRKRVIKVDEDQGGEVVALGAIERVHA
KRAHDKESRLATVLAGREGRESFGRKKKKLNPNSSTTNKQKRKNKPYMMVRQKIMKKSS

Nucleotide sequence

Length: 2,281

>Harore.CG.MTP2014.S535.g03037.01.t
CCATCATTACATTTTTCAACATATGACGCAAAAATATGCTTGAGTAATCCGCGCACGTGT
TTTTACGCATGATTGATTTCACCACAGTGCTGTGCTGTGCTGTGTTCTGAAGTTTAGAAG
GGTGGAAAACAACCGGAGAAAATATGGGGAGAACCAATCAGTTACCCGATAATTTACCCC
AGTTACAGAATTTGATAAAAAGAGATCCCGTTTCTTATCGAGATGAGTTTGAACAACAAT
TTCGGCGATACCAATCGCACATGAATGTGTTTCTGATTCAACCTCAGGAAGAATCGAAAG
AACTCCAAGAATTGACAACATTCATAGCTCAAGTATCACATTGTTATCCAACACTGGTAT
CAGATTTTCCTCAACAATTGAAAGAAGTATTACAGAAACATGGACCATCATTGAATCATG
ACATGCGAATGAATTTCTGCAAATGTTTGATTCTACTTCGAAACAAGAACCTCATTCCTC
CATTGTCATTATTTGAATTGTTTTTTGAGCTTTTTCGTTGCCAGGATAAATTGTTACGCA
AGACGCTCTACAACTTCATAGTTCAAGATGTCAAAAATTTGAATCAGCATCACAAAAACA
ATAAATTGAATCGATCATTGCAGAACTTCATGTATTCCATGCTGTCAGATAATAACAGTA
CTGCTGCCAAAATGTCCCTCGATGTTATGTCTGAGCTCTACCACAGACAAATCTGGAACG
ACGCGAAGACAGTCAACGTGATGAGTACAGCCTGCTTCTCACAGATTCCAAAGGTGTCTG
CCAGTGCACTGCGATTTTTTCTCGGTCAAGATGCAATCAAAAATAAGATAGAAGGTGAAT
CTGATAGCGATGACGATGGTCCAACTGCCCGGGACGTTATCACAAAATATGCCGTTAACA
AAAAAACTACAAGATCCAAAAAGAAGCGTAACAAAGCCCTTCGAGTTTTACACAAACACA
AAAAGAAAATGAAAAACTCTCCTAATTCCTTTTCTGCTCTACAGTTGCTCAACGATCCTC
AAGGTTTTGGCGAGCGACTATACAAGGTGCTATCCAAGTCGAACGAGAGATATGAAGTCA
GGCTGATGATGATGACTCTCCTTTCACGACTCATTGGAATTCATCAACTGTTCATCTTCA
GTTATTATACTTTTATTCAAAAGTATTTTCAACCACATCAAAGAGATGTAACCAAAATTC
TATTGTGCTGTGCCCAAGCAAGCCACGACCTTGTCCCTCCAGAAATAATCCAGCCACTCA
TCAGGACCATAGTTGATAATTTTGTGACTGAAAGAAACTCGAGTGAAGTGATTGCTGTTG
GGTTAAATGCAGTAAGAGAAATATGTGCAAGGTGCCCTCTCGCAATGAACCCGGATCTTT
TGCAGGACCTGGTCCAGTACAAAACATATCGTAACAAAGCTGTAATGATGGCTTCCAAGT
CGCTAATCCAACTTTTTAGAGCAATTAATCCAAGTTTACTGCACAAAAAGGACCGGGGTA
AACCTACAGAAGCGATGAAAGAATTGGAGATCGCCGAGTATGGCCAGGTTATTACAAAAG
ACTTCGTAGCCGGAACAGAAATTTTGAATGAGGAAGTAGAAGAAAACAATGATGGGGAGG
ATGGCTGGGAATCTTGCTCAAACGATAGTGATGATAGTGATGGAAGTTGGCAAGATGTCA
TTCATTCTGATGATGAGGCTGAGGTTGCAAATGATATGAAATTAAGTAAAGAGGAACAAA
TTGTGAAAGCACAGAATGTGAGCCAGATGCGCTTACTAACACAAGAAGAATTTCAGAAAC
TGCGAGCAAATCAGGCAATGAAAGAAGTGGAGCCTGCATCTTCAAAAAAGGTTGGAGGTG
GCAAAAGAAAAAGGGTGATTAAAGTTGATGAAGATCAAGGCGGAGAGGTTGTTGCACTAG
GTGCTATTGAGCGAGTGCATGCAAAGCGGGCCCACGATAAGGAAAGTAGGCTGGCGACTG
TCCTTGCTGGAAGGGAAGGCCGTGAAAGTTTTGGAAGAAAGAAAAAAAAATTGAATCCTA
ATTCATCAACCACTAACAAACAAAAACGTAAAAACAAACCGTACATGATGGTAAGACAGA
AAATAATGAAGAAGAGCTCGTGAAGATCGTTCAGAGAAAAACAAATCTTACTGAGAAACT
CTTTGATAAAGAGAGCAAAGCAAATCAAATAATTATGGAAATAAAAGATTGATTTCTCAG
TTACAAGTGAAGAATTATTTCATTAGAGTAGAATAAATAAAAGATATGCTGCAATAGAAG
G

InterProScan

PANTHER
Sda1 (IPR027312) - T[9-657] 1.4E-257
SUPERFAMILY
ARM-type_fold (IPR016024) - T[52-454] 1.82E-10
Pfam
Uncharacterised_NUC130/133_N (IPR012977) - T[60-111] 6.4E-22
Pfam
SDA1_dom (IPR007949) - T[408-523] 4.7E-36 - T[523-657] 6.7E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SDA1_HUMAN 56.269 % 728 0