- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S56.g08540.01.t
Possible name(s)
C3; C4B; C5
Gene model
Location
S56 [331,362 / 344,938]
Amino acid sequence
Length: 1,814
>Harore.CG.MTP2014.S56.g08540.01.p
MAAFVIEGCAKLKIYYYNKLPSSTGEAFRKFGMKNLVFLLTVYFCCTSAFAAKHTLIAPQ
VLRIGVPEHVVLNLHEGKGQVTVIATLKLNGVQNYPQLPQDASKPINIYVKYDLQPEEQF
DDNRRTYVELLVSARNSAGVKVYDGYLKMRLIKVSGYLHVQTDRPIYRPEETVNVRVIAL
TQLQSPETHRQVEIVIRIPMDNVAVEKKKLQMEANKLIETSFKIPEFPVYGVWSIEARYE
EEAVARWSTIKFSVRPYVLPTFNVGLQLDKQFLLVKDNMADEYITGKITAKYSYGRTVTG
SYFLAAKLKRPHMEQPVLFYQFPDKMKVKASIVNGAQNFRIKGTEVLKVLQENENFYTLV
KEGATMTLECSVTGTEEGVIESELSAPVHFVKSPYTIDITRMSKYYSPGTSFEIKADILD
SISKKPLAGVDYIITDAVGTKIVKDIRSDANGQINVKINMPASKGKKTYKIQTLDFDVPD
ENEAVSQFEIESYDSPSNSILQLSAAEKIAGVGDNNFGIDIWYSKNPGALRYVITSRGSI
VYTGIHDPLPGSRQTNVKVKITADMVPSFRIFFYYFTGANEIVSNSLWVDVTDACKRELQ
VEVPKQVLPGEYVTIEYSGAPNSIIGMSAVDRAAYFLYDESRLTRDSAFKKLNDYDMGCV
REGGRNGQHVFEASECEDFNWGLQIVGGSYSYKEDFSNRCQTGLSGLRKKRQVAVVQAEF
ERQSLKLKCQLDGYLKTLTSETCKERRDYVREVESYECTDWFYQACLERTRSDRVSRTSA
RALGGNAQGFKALAKARSNFEESILWQTDMLDVQGKLSKRILASDSITTFEFDTVSAHNL
FGFCVAETQNMTIFKNLFIQVYSPYSLKRREQAEIRASIFNYGDKTEKVKVSIKVGKDIC
SHFSEKEFTDLITFDIYPNTAETTSFSILPLRVPESERVSVQLRAQREDGFVLDWIEKEI
LVEPEGMLKDDIKGTKAIDLKDDNKQAEKFDIDLRFPEKVVDKTRKCWIYPYANYMGPII
EFDPVTKQPKNDIRKIIRMPGGCGEQTMLSVGPNVAAHSYLKAVKKMLPGTPEELGSIAK
MKSGFANELKYRSTKYGVWAVFTHYEPSTWLNAYVNKVFAQAKEYYTDMDVKPICDSIKW
LPSKQEADGGFHTGGKVLHQEMHGAVGTKLSLTAYVVISLRKSTAVCPALTSATEAAINK
AIAYIVKNENNGQLEQPYTLALTTYAMVIADPRNPMTTRLTKKLLSKLQYSPDNRLASWK
GAPANAIKGTGTHAYWYIRKPLAIDVEATGYALLSLLTGKGQAEITQGYLDLIRKIVLWL
IEQRDANGAFSTTQDTVVGLQALSEYMIWSNNVDPPKRDVEIHLTITGINGSLWEKTPKR
IFLDKSNENYTTPIQVPQSVIENRFLKVHAEGTGEGSLSYRCVYRTLVEEDACHFQLQVE
LEKVESAQVALPGSEPPFHVKLKLYISKPVGDPAGQSIVEVNLISGYEPIEATLEQMSRK
FVVDGKIERYEIAKQKVILYLKDVTSKPRRLAFLLRRKVFVNKPEPSSVTLYSYYEPTVK
CTTFYALGDRIPQLRTTPCKRDANGKDICECAEGGCLTCRSREQQREKTLCSPAMKGKCY
SCKENEKCFDMTKAACESNYVYVIQVLDDIENQDGIFVEFRGEIQLVYKMGNDVLAARNQ
TRKFTTRTDCFQKCEDPELTKGGKDGKKKDFISKGRTMLVMAKAPEQFTAKSGLPESVYP
LDENSYVERVFPDDKCKLAKTETENSCADLSKLSKGKKKKCIKHIATKQACENMRQLRRM
LIKGCDSQFDERKK
Nucleotide sequence
Length: 6,269
>Harore.CG.MTP2014.S56.g08540.01.t
ATGGCGGCATTCGTTATAGAAGGTTGTGCTAAGTTAAAGATTTATTATTATAATAAATTA
CCTAGTAGCACAGGTGAAGCGTTTAGGAAATTTGGAATGAAGAACTTAGTGTTCTTACTT
ACTGTTTATTTTTGCTGCACAAGTGCCTTTGCAGCCAAACACACGTTAATTGCGCCACAA
GTGTTGCGGATCGGAGTACCTGAGCATGTCGTCCTTAATTTACATGAGGGGAAAGGACAA
GTGACTGTCATTGCCACTCTGAAATTAAACGGAGTACAAAATTATCCACAACTACCGCAA
GATGCAAGCAAGCCTATAAATATCTATGTAAAGTACGACTTACAACCCGAAGAACAATTT
GATGATAACAGAAGAACTTATGTAGAATTGCTTGTCAGTGCCAGAAATTCCGCCGGTGTA
AAAGTGTACGATGGATATTTGAAAATGAGATTGATTAAAGTCAGTGGATATTTACATGTT
CAGACCGATCGTCCTATATACAGGCCAGAGGAAACAGTAAATGTCCGTGTGATTGCTCTC
ACTCAACTGCAATCGCCAGAAACCCACCGTCAAGTTGAAATTGTTATTAGGATCCCGATG
GATAACGTTGCAGTGGAGAAGAAGAAATTGCAAATGGAAGCTAACAAGCTTATCGAGACT
TCATTTAAAATTCCTGAATTCCCGGTTTATGGAGTCTGGTCCATAGAAGCAAGATACGAA
GAAGAAGCTGTAGCAAGATGGTCTACTATTAAATTCTCTGTGAGACCGTATGTGCTACCG
ACATTCAATGTTGGTTTACAATTGGATAAGCAGTTCCTGCTTGTCAAAGACAACATGGCT
GATGAATACATAACAGGAAAGATAACAGCAAAATATAGTTATGGTAGGACTGTTACAGGC
TCCTACTTTTTGGCAGCTAAGCTAAAGAGGCCGCACATGGAACAGCCGGTTTTGTTTTAT
CAGTTCCCAGACAAAATGAAAGTTAAGGCATCAATCGTGAACGGTGCTCAAAATTTCCGT
ATCAAAGGAACGGAGGTACTAAAGGTACTGCAAGAAAATGAAAATTTTTACACTCTTGTT
AAGGAAGGTGCAACTATGACCCTGGAATGCTCTGTTACTGGTACTGAAGAAGGTGTGATT
GAATCTGAACTTTCTGCTCCTGTACATTTCGTGAAATCGCCCTACACCATCGACATCACA
CGAATGTCAAAGTATTATTCTCCTGGAACGTCGTTCGAGATTAAGGCAGATATATTGGAC
TCAATCTCGAAGAAACCTCTTGCAGGCGTGGATTATATTATAACAGATGCTGTTGGAACA
AAAATCGTTAAAGATATCAGATCTGATGCGAACGGTCAAATCAATGTGAAAATTAATATG
CCTGCAAGTAAAGGCAAAAAAACTTATAAAATCCAAACACTGGATTTTGATGTCCCGGAT
GAAAATGAAGCAGTTTCTCAGTTTGAAATTGAATCTTATGACTCTCCTTCAAACAGTATT
TTGCAGTTATCTGCTGCGGAAAAAATAGCCGGAGTAGGAGACAATAACTTTGGAATTGAC
ATTTGGTACAGCAAGAATCCTGGAGCCTTGCGATATGTTATCACGTCTCGTGGGTCAATC
GTTTATACCGGTATACATGATCCTCTTCCAGGAAGCAGACAAACGAATGTGAAGGTCAAA
ATCACGGCGGATATGGTCCCGTCATTCAGAATATTTTTTTACTATTTCACCGGAGCCAAT
GAAATAGTATCAAATTCCCTTTGGGTTGATGTTACGGATGCTTGCAAAAGGGAACTGCAA
GTAGAAGTTCCAAAGCAGGTACTTCCAGGAGAGTATGTTACAATTGAGTATTCAGGGGCT
CCTAATTCTATAATTGGGATGTCGGCTGTTGATCGTGCTGCCTATTTTCTGTATGATGAA
AGTCGACTTACTCGAGACAGTGCATTTAAGAAGTTAAATGACTATGATATGGGATGTGTG
AGGGAAGGTGGTAGAAATGGCCAACATGTGTTTGAGGCAAGTGAATGTGAAGATTTCAAC
TGGGGCCTTCAAATCGTTGGTGGTAGTTATAGCTATAAAGAAGATTTTAGTAATCGCTGC
CAAACTGGTTTATCGGGCTTGAGGAAGAAGAGGCAAGTTGCTGTTGTTCAAGCCGAGTTT
GAAAGACAAAGCCTTAAGCTGAAATGTCAATTGGATGGCTATTTGAAAACGTTAACTAGT
GAGACTTGTAAGGAGCGCAGGGACTATGTTCGCGAGGTAGAGTCGTATGAATGTACAGAT
TGGTTTTATCAAGCCTGCCTTGAACGTACCCGTTCAGATCGAGTGTCTCGGACATCTGCG
CGTGCACTTGGAGGTAATGCACAGGGATTTAAGGCACTTGCAAAAGCACGTTCTAATTTC
GAAGAAAGCATACTTTGGCAAACTGATATGCTAGATGTCCAAGGAAAACTTTCAAAACGA
ATCTTAGCAAGCGACAGCATCACGACTTTCGAATTTGATACAGTTAGCGCACATAATCTA
TTCGGTTTCTGTGTTGCTGAAACTCAAAACATGACAATATTTAAGAACCTTTTCATACAA
GTTTACTCTCCTTACTCCCTGAAACGCAGAGAACAAGCAGAAATACGAGCGAGCATTTTT
AACTATGGAGACAAAACCGAAAAAGTTAAAGTCAGTATCAAAGTTGGCAAGGATATATGT
TCACATTTCTCTGAAAAGGAATTTACTGATTTGATTACGTTCGACATTTACCCAAACACC
GCCGAGACGACATCTTTTTCAATCTTGCCTCTGCGAGTGCCAGAAAGCGAACGTGTTAGC
GTACAGCTTCGTGCTCAGAGAGAAGATGGTTTTGTGCTTGACTGGATAGAGAAAGAAATA
TTGGTAGAGCCTGAGGGAATGTTGAAAGATGATATCAAAGGAACAAAAGCAATTGATCTC
AAGGATGATAATAAGCAAGCGGAGAAATTTGATATCGATCTGCGATTTCCGGAGAAAGTC
GTCGATAAAACGAGAAAATGCTGGATCTACCCTTATGCTAACTATATGGGTCCAATCATC
GAATTTGACCCAGTCACTAAACAACCAAAGAATGATATTAGAAAGATTATCAGAATGCCA
GGAGGGTGCGGAGAACAAACCATGTTGTCTGTTGGTCCGAACGTGGCCGCTCATAGCTAT
CTGAAAGCTGTAAAAAAGATGCTTCCTGGCACACCTGAAGAGCTTGGTTCGATTGCAAAA
ATGAAATCAGGATTCGCAAATGAACTCAAGTATAGATCAACCAAATATGGTGTTTGGGCT
GTGTTTACTCATTACGAACCAAGTACATGGCTGAATGCTTATGTTAACAAAGTTTTTGCC
CAAGCCAAGGAGTATTACACAGATATGGATGTGAAACCAATATGCGATTCCATTAAATGG
TTGCCTTCCAAACAAGAAGCAGACGGAGGCTTTCATACTGGCGGGAAAGTGCTTCACCAA
GAAATGCATGGAGCTGTAGGAACAAAGTTAAGTTTGACAGCTTATGTAGTAATTTCCTTG
AGAAAATCAACAGCAGTCTGCCCTGCATTGACATCGGCCACCGAAGCGGCAATAAACAAG
GCAATTGCTTATATAGTGAAGAATGAAAATAATGGACAATTGGAACAGCCCTATACACTG
GCACTCACTACCTATGCTATGGTTATAGCTGATCCTAGAAATCCAATGACGACGAGATTG
ACTAAAAAATTGTTGTCCAAGCTTCAGTACTCACCAGACAATCGACTGGCTTCCTGGAAA
GGTGCACCAGCCAACGCCATTAAAGGAACTGGAACGCACGCCTACTGGTATATCCGAAAA
CCATTAGCAATTGATGTGGAAGCCACAGGTTATGCATTACTGTCCCTCCTAACAGGAAAG
GGCCAAGCAGAGATTACCCAAGGGTACTTGGACCTTATCAGAAAAATAGTTCTATGGCTA
ATTGAGCAGAGGGATGCCAACGGAGCCTTCTCAACCACCCAGGACACAGTTGTGGGATTA
CAGGCTCTGTCAGAATATATGATCTGGAGCAACAATGTGGATCCTCCCAAGCGTGATGTT
GAAATCCATCTCACAATCACAGGAATCAACGGTAGCTTATGGGAAAAAACACCGAAACGC
ATATTTCTTGACAAATCCAATGAAAATTACACAACACCTATTCAAGTGCCTCAGTCAGTT
ATCGAAAACCGCTTTCTTAAGGTTCATGCTGAAGGCACTGGGGAAGGATCATTATCATAC
AGATGTGTCTATCGCACTCTTGTGGAAGAAGATGCTTGTCATTTTCAACTCCAGGTTGAA
CTTGAAAAGGTTGAAAGTGCACAAGTAGCACTCCCGGGAAGTGAACCACCATTTCATGTC
AAATTGAAGCTCTATATTTCAAAACCAGTTGGTGATCCGGCTGGACAATCAATTGTCGAA
GTCAACCTTATTTCAGGATATGAACCTATTGAAGCAACTCTAGAGCAAATGAGTCGAAAA
TTTGTAGTGGATGGAAAAATTGAAAGATATGAAATAGCCAAGCAGAAAGTCATTCTTTAT
TTAAAGGATGTCACAAGTAAACCGAGAAGACTTGCATTTCTACTGCGGAGAAAGGTCTTC
GTCAATAAGCCGGAACCGTCCTCTGTCACTCTGTATAGTTACTACGAACCAACGGTGAAA
TGTACCACTTTCTATGCACTCGGAGATAGAATTCCTCAGTTGCGAACGACTCCTTGCAAG
CGAGATGCGAATGGAAAAGATATTTGCGAATGTGCAGAAGGAGGTTGTTTAACATGCAGA
TCACGTGAACAACAACGTGAAAAAACCCTTTGCTCGCCTGCAATGAAAGGAAAATGCTAC
TCGTGTAAAGAGAATGAAAAATGTTTTGACATGACTAAAGCGGCTTGTGAGAGCAATTAT
GTTTACGTAATCCAAGTTCTTGACGATATAGAAAATCAGGATGGAATTTTTGTCGAGTTT
CGTGGAGAAATACAATTGGTGTACAAAATGGGAAACGATGTACTGGCAGCACGTAACCAA
ACAAGGAAATTCACAACTAGAACGGATTGTTTCCAGAAATGTGAAGATCCTGAATTAACA
AAGGGTGGAAAAGATGGAAAGAAAAAGGACTTCATAAGCAAAGGACGTACAATGTTAGTC
ATGGCCAAGGCACCAGAACAATTCACAGCCAAAAGTGGACTTCCCGAATCAGTTTACCCG
TTGGATGAAAATTCGTATGTGGAACGAGTCTTTCCAGATGATAAATGCAAGCTTGCCAAG
ACTGAAACGGAGAATAGTTGTGCTGATTTGTCGAAGTTGTCCAAGGGTAAAAAAAAGAAG
TGCATAAAGCACATTGCAACGAAACAAGCCTGTGAAAACATGAGGCAACTGCGAAGAATG
TTAATAAAGGGTTGTGACAGTCAATTTGATGAAAGAAAGAAGTGATGATAGAAGAATGAA
ATTGTTTTTATTTTTGGAATTTTTTCAATCAAGAGCATGGTTACAGAAAACACAGAAGTA
TGTGCAAAATAATAAATCCATTGCTGTGCTGCGGTACTTTTCAGTGATGCACAAGTCATG
CAACTTAAGTGCAGGTTGACTTTTCTGGGGTAGGTAAAAAAAGCATAATTCCATTAATAT
ATTTGGATTAAAATTTAAATCTTGATTGCTCGTAGAAAATGAAAGAAATTGAAGGATAAA
AGATATAAACCACAGAAGAACCAGTTTGGCTTTTACTACTGTTATAATTACAAATGCAAG
TACTAATGAATTATCAGCCATAGAAGAATGAAGTAGCTATATGGCATCTTAACCAGCAGA
CACCTTCGAGGGACTTCGGATAAGAAAGAACATCAAGGAATAGTAAACATTCAGTACAAG
TAGCAAACTATTTTTGGTTAGTTAATTAATCAGAAATCTGCAGAATCAGAAACCTGCATT
ACTGAACAGACAGACAGAAAGGAAATGAATTTATCCTGATTTTATCAATTGAAAGTTTAC
GGAGAACTTTACAGGGTACAAGTACAGTGAAATTTGTCAAATCAAAATGATTTAGATGCA
ACATTATTTGAATATGAATTAAATATATTAGAAAGATATGTGAAAAACATTATGCAAAAT
AAAATAGATGCTCTTCTAATAAATTAGTTGTTTTGCTGCAGATATTCTTCAAATTGCTCT
TGCTCTAGTCTTGTCATCAAGTGGTTTAATGCATAGATCTGATACAGTATTGAAAAGGAA
ATTACTATTCATATTTCAGCTCCGAATGT
| Pfam |
A2M_N (IPR002890) - T[158-248] 2.7E-15 |
| Gene3D |
Ig-like_fold (IPR013783) - T[396-497] 7.8E-106 - T[858-963] 8.8E-142 - T[1540-1547] 8.8E-142 |
| SMART |
A2M_N_2 (IPR011625) - T[501-637] 5.2E-23 |
| Pfam |
A2M_N_2 (IPR011625) - T[530-636] 7.7E-21 |
| Pfam |
Macroglobln_a2 (IPR001599) - T[803-892] 1.2E-17 |
| SMART |
Macroglobln_a2 (IPR001599) - T[803-893] 9.0E-19 |
| SUPERFAMILY |
Terpenoid_cyclase/PrenylTrfase (IPR008930) - T[1032-1349] 1.96E-66 |
| Pfam |
MacrogloblnA2_thiol-ester-bond (IPR019565) - T[1035-1061] 2.9E-9 |
| ProSitePatterns |
MacrogloblnA2_CS (IPR019742) - T[1040-1048] . |
| Pfam |
A2M_comp (IPR011626) - T[1084-1347] 3.7E-66 |
| Gene3D |
A-macroglobulin_rcpt-bd_sf (IPR036595) - T[1431-1539] 8.8E-142 - T[1548-1575] 8.8E-142 |
| SUPERFAMILY |
A-macroglobulin_rcpt-bd_sf (IPR036595) - T[1433-1567] 4.71E-23 |
| SMART |
A-macroglobulin_rcpt-bd (IPR009048) - T[1474-1565] 2.2E-22 |
| Pfam |
A-macroglobulin_rcpt-bd (IPR009048) - T[1475-1565] 7.5E-19 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[1615-1770] 4.16E-7 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[1619-1767] 11.679 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[1634-1761] 2.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO3_HUMAN | 25.819 % | 413 | 1.83E-118 |
| CO5_HUMAN | 23.802 % | 342 | 1.67E-95 |
| CO4B_HUMAN | 24.631 % | 332 | 4.47E-92 |