- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S575.g02915.01.t
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
S575 [4,566 / 5,130]
Amino acid sequence
Length: 187
>Harore.CG.MTP2014.S575.g02915.01.p
MSYPLQAKAISYHRPQDYNAFGERRTDITSEENEIDLLHRSHCEEIFQQRHSNNLRRRML
TEVSDEDYAKRFHQWTSEDIGDFKIQFEIFDLNRDGVIDFKEMNNVLDEFGESSKPNDRW
GCFSEMDTDQSGTIDFEEFLMVMMKLQQADSKSRADENISNIVARGAEQVAKLRRMSVYK
QLTNGLF
Nucleotide sequence
Length: 564
>Harore.CG.MTP2014.S575.g02915.01.t
ATGAGCTATCCGTTGCAGGCGAAAGCAATTAGCTATCACAGGCCGCAAGATTATAACGCT
TTCGGAGAACGGAGGACAGATATTACCAGTGAAGAAAATGAAATTGATTTGCTTCATCGT
TCCCACTGCGAAGAAATATTCCAGCAACGCCATAGCAACAATCTCCGTCGTAGGATGCTG
ACGGAGGTCTCTGACGAAGATTATGCTAAGCGATTCCATCAATGGACCTCGGAAGATATC
GGAGATTTTAAAATTCAGTTTGAAATCTTTGATCTGAATCGCGACGGTGTAATAGATTTC
AAGGAGATGAACAACGTTCTTGATGAATTCGGAGAATCGAGTAAACCTAACGATCGATGG
GGTTGTTTTAGTGAAATGGACACGGATCAGTCCGGAACGATCGATTTTGAGGAATTTTTA
ATGGTAATGATGAAGTTGCAACAAGCCGACAGCAAATCAAGGGCGGATGAAAACATAAGT
AACATCGTAGCTCGCGGAGCGGAGCAAGTTGCTAAACTCCGTAGAATGTCGGTTTACAAA
CAGTTGACGAATGGGTTATTTTAA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[70-148] 3.25E-16 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[78-113] 12.7 - T[122-149] 11.835 |
| SMART |
EF_hand_dom (IPR002048) - T[82-110] 1.8 - T[122-146] 0.0067 |
| Pfam |
EF_hand_dom (IPR002048) - T[86-106] 4.5E-5 - T[123-146] 2.2E-7 |
| CDD |
EF_hand_dom (IPR002048) - T[87-144] 1.10687E-12 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[91-103] . - T[127-139] . |
| Protein Name | Identity | Bit Score | e-value |
|---|