- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S575.g13659.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S575 [44,925 / 46,360]
Amino acid sequence
Length: 378
>Harore.CG.MTP2014.S575.g13659.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
SKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Harore.CG.MTP2014.S575.g13659.01.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAATGGATCAGGATTGGTC
AAGTCTGGTTTTGCCGGTGATGACGCACCAAGAGCAGTTTTCCCATCAATCGTTGGTCGT
CCAAGACATCAAGGTGTCATGGTCGGTATGGGACAGAAGGACAGCTACGTAGGAGATGAG
GCTCAAAGCAAAAGAGGAATCCTCACTTTGAAATATCCCATTGAACATGGTATCATCACA
AACTGGGATGATATGGAAAAGATCTGGCATCACACCTTTTACAATGAACTCCGTGTCGCT
CCTGAAGAGCATCCAACTCTTCTCACAGAAGCTCCGTTGAATCCCAAGGCAAATAGAGAG
AAGATGACACAAATTATGTTCGAGACCTTCAATGTCCCAGCCATGTACGTCGCAATTCAA
GCTGTGCTATCACTATATGCTTCTGGAAGAACAACTGGTATTGTATTGGATGCTGGTGAT
GGTGTCTCCCACAACGTCCCCATCTACGAAGGATACGCTCTTCCTCATGCTATCGCAAGG
TTAGATTTGGCCGGTCGTGATCTAACTGATTACTTGATGAAGATTCTCACAGAAAGAGGA
TATTCTTTCGTCACTACTGCCGAACGTGAAATCGTTCGTGATATCAAGGAAAAGTTGTGC
TACGTCGCACTCGACTTCGAACAAGAGATGGCAACTGCAGCTTCGTCTACTTCACTCGAA
AAGAGCTACGAGCTTCCCGATGGACAAGTTATCACTATTGGAAACGAAAGATTCCGTTGC
CCGGAAACTCTTTTTCAACCATCATTCATTGGTATGGAATCAGCTGGTATTCACGAAACC
ACGTACAATTCCATCATGAAATGCGATATTGACATCCGTAAGGATCTTTACGCTAACAAC
GTTCTCTCTGGTGGAACCACCATGTATCCTGGTATTGCTGATCGTATGCAGAAGGAAATC
ACTGCCCTTGCTCCAAGTACCATGAAGATCAAAATCATTGCTCCTCCTGAACGTAAATAT
TCTGTCTGGATTGGAGGATCTATCCTTGCTTCCCTCTCTACCTTCCAACAGATGTGGATT
AGCAAACAAGAATACGATGAAGCCGGACCATCCATTGTTCATAGAAAGTGTTTCTAA
| PANTHER |
Actin (IPR004000) - T[5-377] 2.1E-266 |
| Pfam |
Actin (IPR004000) - T[6-378] 1.1E-147 |
| SMART |
Actin (IPR004000) - T[8-378] 4.3E-233 |
| PRINTS |
Actin (IPR004000) - T[29-38] 1.8E-57 - T[52-63] 1.8E-57 - T[64-86] 1.8E-57 - T[118-131] 1.8E-57 - T[143-162] 1.8E-57 - T[239-255] 1.8E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.326 % | 767 | 0 |
| ACTS_HUMAN | 97.059 % | 766 | 0 |
| ACTC_HUMAN | 97.594 % | 769 | 0 |