- Clone 'ma003o10' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S577.g13427.01.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
S577 [2,329 / 11,621]
Amino acid sequence
Length: 760
>Harore.CG.MTP2014.S577.g13427.01.p
RLLAMERTKFNILCLIFLHCYLCIVYCQQTISVPDEDDTLKIRLRDGNNQHEGRVEIKHK
DDWGTICDDDWDIHAANVVCKMLGYVSATSFVHSGKYGPGEGPILLDNVHCNGEENNLLE
CEIREFGDHDCTHHEDAGVVCSPQRLPEYLMKTWKNTEPSFDQMRLKPPRGMKKRMPQVD
GYLEMFHDGKWRGVCSEGWTHESSRIACGQLGFPDASVLGHMYSYLKKEKHKNFWLTNVT
CYGNESRLSQCNFTKLNYTDHRACSTNTPVIIRCTVGDFYSPFSLKKHIRNAKRKHQKKT
EIKTTLAKIRVKGGASVGEGRLEVMHDGRWGAVCHRGWDMQDANVACRELGFGTAKRIYI
NSYFGNAHGPIWLSNLRCLGSEDKLADCPHEKISKMYTGYGEVDSDECSHFEEAGIACQV
PTMSISNRIRVVGGRNPMEGRVEVQIARKWGEVCSDNWGSKEAMVVCRQLGLGYALHALT
EVWYYPGSENTEGIIMTGVKCKGDEIALHYCEHDGKNISKCGDSKKTMTPFAGVICTDSS
PDLILDIPMLESSIHMEDRGLSQLLCAAEEDCLSSSADNIDLTVSYGIRRLLRFSSRVWN
RGRADFRPAKLPNDWIWHQCHGHFHSMAEFTHYDVISLNKTKVAEGHKASFCLEDTHCDP
GVSPRYDCDQPGGGVQGVTVGCSDTYAYNIDCQWIDITDVKKGNYLLKIHLNPQHLVPES
DFSNNEVICNLQYTGQEIFVWNCHITAFTSKVDKVIDIDL
Nucleotide sequence
Length: 2,681
>Harore.CG.MTP2014.S577.g13427.01.t
AGGTTGCTTGCGATGGAGCGTACTAAGTTCAATATCCTATGTTTGATATTCCTTCATTGT
TACTTGTGCATTGTGTATTGTCAGCAAACAATTTCCGTACCAGATGAAGATGACACATTG
AAAATCAGACTGCGTGATGGGAACAATCAGCATGAAGGCAGAGTGGAAATCAAACACAAA
GACGATTGGGGAACAATATGCGATGATGACTGGGATATTCATGCTGCAAACGTGGTCTGC
AAGATGCTTGGCTATGTATCTGCCACTTCATTCGTTCATAGTGGAAAATATGGTCCTGGA
GAAGGTCCGATATTACTTGACAATGTTCACTGCAACGGTGAGGAAAATAATCTTCTTGAA
TGCGAGATTCGAGAGTTTGGAGATCACGACTGTACTCATCATGAGGATGCAGGAGTGGTG
TGCAGCCCCCAACGACTTCCAGAATATTTAATGAAAACATGGAAAAACACCGAACCCAGC
TTTGACCAAATGCGATTGAAGCCGCCGCGCGGAATGAAAAAGCGAATGCCTCAGGTGGAT
GGTTATCTTGAAATGTTTCACGATGGTAAATGGAGAGGAGTTTGTAGCGAAGGATGGACC
CATGAAAGTTCAAGAATTGCTTGCGGACAACTTGGATTTCCCGATGCTTCAGTGCTTGGC
CATATGTACAGTTATTTGAAAAAGGAAAAGCACAAAAACTTTTGGCTGACGAATGTCACG
TGTTACGGTAACGAAAGCAGATTGTCCCAATGCAATTTCACGAAACTTAACTACACCGAC
CACAGAGCTTGTTCAACAAATACGCCAGTGATAATACGTTGTACTGTCGGAGATTTTTAT
TCCCCTTTTTCGCTGAAGAAACACATCAGAAATGCAAAAAGGAAACACCAAAAGAAAACG
GAAATAAAGACTACACTTGCAAAGATTCGTGTGAAAGGTGGAGCTTCGGTCGGCGAAGGT
AGATTGGAAGTGATGCATGACGGTCGCTGGGGGGCGGTTTGTCATCGTGGTTGGGATATG
CAGGACGCAAATGTAGCTTGCAGGGAACTCGGCTTTGGAACAGCGAAACGAATCTACATT
AATTCGTACTTTGGAAATGCTCATGGTCCGATCTGGTTAAGCAATCTTAGATGTCTTGGA
AGTGAAGACAAATTGGCTGATTGCCCACATGAGAAAATCTCCAAAATGTACACTGGCTAT
GGTGAAGTTGATTCCGATGAATGTTCTCATTTTGAAGAAGCAGGAATTGCATGTCAAGTT
CCTACTATGAGCATTTCGAACAGGATTCGAGTTGTTGGTGGAAGAAATCCTATGGAAGGT
CGAGTTGAAGTACAAATAGCTCGTAAATGGGGAGAAGTTTGCAGTGACAACTGGGGATCG
AAGGAAGCGATGGTTGTATGTAGACAACTTGGACTCGGATACGCTCTGCATGCATTGACG
GAAGTGTGGTATTATCCTGGGAGTGAAAATACAGAGGGTATCATCATGACTGGAGTTAAA
TGCAAAGGAGACGAAATAGCCTTGCACTACTGCGAACATGACGGAAAAAATATTTCAAAA
TGCGGAGATTCAAAGAAGACGATGACCCCGTTCGCCGGGGTCATTTGTACCGACAGTTCA
CCGGATCTCATCCTTGATATACCGATGTTGGAGAGTTCGATACATATGGAAGATCGCGGT
TTAAGCCAACTGCTGTGTGCTGCGGAAGAAGACTGTCTTTCCTCGTCTGCTGATAATATT
GATCTTACTGTATCATACGGAATAAGACGCTTGTTGCGATTTTCTTCGCGGGTTTGGAAC
AGAGGACGTGCAGATTTCAGGCCAGCGAAACTTCCTAACGACTGGATATGGCATCAGTGT
CACGGTCATTTTCACAGCATGGCCGAATTCACACATTATGATGTCATAAGCTTGAACAAA
ACAAAGGTCGCTGAAGGTCACAAGGCAAGTTTTTGTCTGGAGGATACACATTGTGATCCC
GGTGTTTCACCAAGATATGATTGTGATCAACCGGGTGGTGGCGTACAAGGGGTCACTGTT
GGTTGTTCTGATACATACGCATATAATATTGACTGCCAGTGGATAGATATTACAGATGTG
AAAAAGGGAAATTATTTGCTAAAGATTCATTTAAATCCACAGCATTTGGTCCCGGAGTCA
GATTTTTCTAATAACGAAGTAATCTGTAATCTCCAATACACCGGACAAGAGATCTTTGTA
TGGAATTGCCATATAACGGCCTTTACATCAAAGGTCGACAAAGTGATCGATATCGACCTC
TAGATGATGACTACGACCCGATAGTAACTGCGAAATACTATTCACAATCGATGTTTCCAT
GAGGCAAGAGAGTTCAACAGGAGTTGCGTCGTGTTCTGCCTTTTTTATTCGCTTCGTTTG
ACGGCTGTAGTTCTTTTGAATATAGATTGCTTCAGCATAGACATAGACAGTGTTATTTTT
ACATGCATAAATTTCTATGTTCATGAGTATTGCTTTTCACGCACTATAAGGTGCGTATAT
TTCAAATAACTTGAATTTGACAACGTATAAGGCGCAGTTTTCTATTTATATATTATAAAA
GGCCAAGTGTTAAGAAAATGAGATTGAAAGCGCGGTTAACAATCATACACATTAGTACTT
ATACGCTTACATGTTGCTATCATCTGCCGAGAAGCAATTGC
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[38-146] 2.49E-38 - T[179-275] 2.75E-21 - T[307-419] 1.7E-32 - T[428-542] 2.49E-27 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[40-148] 1.1E-40 - T[163-278] 1.3E-22 - T[302-422] 4.2E-34 - T[423-542] 1.8E-28 |
| SMART |
SRCR-like_dom (IPR017448) - T[42-142] 2.7E-52 - T[164-275] 1.4E-16 - T[309-419] 3.7E-41 - T[429-537] 2.1E-34 |
| PRINTS |
SRCR (IPR001190) - T[42-58] 1.7E-20 - T[61-72] 1.7E-20 - T[76-86] 1.7E-20 - T[107-121] 1.7E-20 - T[130-142] 1.7E-20 |
| ProSiteProfiles |
SRCR (IPR001190) - T[42-142] 31.878 - T[164-275] 19.296 - T[309-419] 28.967 - T[429-537] 25.181 |
| Pfam |
SRCR (IPR001190) - T[46-142] 3.6E-30 - T[178-274] 5.9E-20 - T[313-419] 1.5E-25 - T[432-536] 9.4E-24 |
| ProSitePatterns |
SRCR (IPR001190) - T[47-84] . - T[314-351] . - T[434-471] . |
| Pfam |
Lysyl_oxidase (IPR001695) - T[541-745] 2.5E-90 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[550-574] 1.5E-37 - T[597-618] 1.5E-37 - T[619-639] 1.5E-37 - T[669-691] 1.5E-37 - T[692-711] 1.5E-37 - T[712-729] 1.5E-37 - T[730-748] 1.5E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 41.97 % | 613 | 0 |
| LOXL3_HUMAN | 44.993 % | 623 | 0 |
| LOXL4_HUMAN | 43.203 % | 613 | 0 |