- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S57.g02481.01.t
Possible name(s)
AVPR1A; GNRHR; OXTR
Gene model
Location
S57 [50,634 / 61,994]
Amino acid sequence
Length: 320
>Harore.CG.MTP2014.S57.g02481.01.p
SVGNLFVLSCVYKKASSSHVHMIMMHLTLADLAFTFLVMLNDAIWNTTMEWKGGNVLCKI
CQMCKQMGMYINSFMVVVIALDRCCSILQPMSTLPRQRMRTKYMVILAWTVSILSAIPAA
VLFSVEEADPCPDHSPFYQCVDYLVVKSPFDRRPYYFFTMFMSFILPMIVTVVSYSLVVY
EITNMMRRDRVMMGRRSSNIVNITRARRKTMFMTSLVTLTFVILWGPYYGIGIAYWINEN
NVVSREHIPSHNRLHHDQVIIQFLSMVNLVYYFSGGDDDLFRYYVRASSDTSVVIRSFYE
RCSSEIWSVGLTMRKNSDLQ
Nucleotide sequence
Length: 964
>Harore.CG.MTP2014.S57.g02481.01.t
CTCGGTTGGAAATCTCTTTGTTCTATCGTGCGTTTACAAAAAAGCATCTTCCTCACACGT
ACACATGATAATGATGCATCTTACTCTAGCAGATCTCGCATTTACATTCCTTGTAATGCT
AAATGATGCTATATGGAATACGACGATGGAATGGAAAGGGGGAAATGTGCTTTGCAAAAT
CTGTCAGATGTGTAAGCAAATGGGAATGTACATCAACTCGTTCATGGTTGTGGTGATAGC
CCTCGATCGATGCTGTAGCATCTTACAACCGATGTCGACTCTGCCCAGACAACGAATGCG
GACAAAATACATGGTCATCCTTGCGTGGACTGTTAGTATATTAAGTGCCATACCAGCGGC
TGTCTTATTCTCCGTTGAGGAAGCTGATCCTTGCCCTGATCACAGTCCATTCTATCAATG
CGTTGACTATCTAGTGGTAAAGAGCCCATTCGACAGGAGGCCGTATTATTTCTTCACTAT
GTTCATGAGTTTCATTTTACCAATGATAGTGACGGTCGTCTCATATTCTCTGGTCGTTTA
TGAAATTACCAATATGATGCGACGTGACCGAGTTATGATGGGAAGACGAAGTTCAAACAT
CGTCAACATCACGCGGGCTCGAAGAAAAACCATGTTTATGACGTCATTGGTCACGTTAAC
GTTCGTTATTTTATGGGGACCTTACTACGGTATCGGTATCGCGTACTGGATCAATGAAAA
CAACGTCGTTTCCAGGGAACACATTCCCTCGCATAACAGATTGCATCACGATCAAGTTAT
CATACAATTTCTATCCATGGTTAACTTGGTATATTATTTTTCAGGAGGTGATGATGATCT
TTTTCGTTACTATGTACGTGCATCCAGCGATACATCCGTTGTTATACGGAGTTTTTATGA
AAGATGTTCGAGTGAAATTTGGTCAGTTGGTCTCACAATGCGAAAGAACAGTGACTTGCA
ATAA
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[3-272] 27.513 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[3-250] 1.1E-29 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[20-41] 1.5E-15 - T[65-87] 1.5E-15 - T[100-121] 1.5E-15 - T[156-179] 1.5E-15 - T[210-234] 1.5E-15 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[71-87] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GNRHR_HUMAN | 34.211 % | 131 | 1.04E-35 |
| V1AR_HUMAN | 24.291 % | 95.1 | 5.83E-22 |
| OXYR_HUMAN | 25 % | 94.4 | 9.9E-22 |