- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S5.g08724.01.t
Possible name(s)
CRISPLD1; CRISPLD2; VIT
Gene model
Location
S5 [772,285 / 786,443]
Amino acid sequence
Length: 769
>Harore.CG.MTP2014.S5.g08724.01.p
MIWIAMLEVGKLWFCSMTVVLLSNSAHAASIVESDHYYRIQSIGLSEKKGAEVDRNVIYL
RPDYNPFSCYVEARHIEGDVFTAICPSGCDHFADRTWGSGVYKDDSCFCAAAIHDGIISA
ELGGAVTVRKIEGKSSYTGNIRNGIATKSYGSWNGSFIFQNAGKARRPTYDVTCDVPANW
IKDTDFNVVCPNGCDVMTERIWGTGVYTDDSYICTAAIHNDKIKGSKGGEVHVIKTGQQT
QFIGTEKNKIASKDKLSSYDSFKFEGIEGKSSTTIEVSCYYRVDHLEEEVFTVICPPGCD
SISDQVYGTGIYTQDSFLCASAIHAKRIHAPMGGMVTVMKTHGKIRFLGSLSNGIASKDA
HNQSLTSFIFQGSCDMRGDHLKNDVATFMCDRNCDEESYEVWGSDTYKSKSHVCAAAAHA
GIISVSLGGPVTVRKVPGLGYYTGTTKQRIISKSSAESNTAFVFADNIQKVGSVLAVTCD
VTADFISDDMFSLKCPPGCVNGKTKIWGDGIYTSDSPLCAAAVHAGKLQDSLGGKITVHK
IKGKATYGQALRNGIQSFEYGSWSSASVVFQITCETRANFMVDELFTVVCPAGCDAVENE
IWGTAIYSDDSYICSAAIHDGRLNADVGGQIAVGKVPGMSAYAGSDMNGVESRSKEKWRK
SFVFQDVLLQFMSSFTVTCDVEANMILDNQFSVICPPNCDVETERVWGTDVYTQDSYICA
AAIHAGKIQASPGGRVTVVTTKAESFTGTNRNEISSKSYDKATKAIKFM
Nucleotide sequence
Length: 2,310
>Harore.CG.MTP2014.S5.g08724.01.t
ATGATCTGGATTGCCATGTTGGAAGTTGGGAAATTATGGTTCTGCAGCATGACTGTTGTT
CTACTCTCTAATTCTGCCCACGCAGCATCGATCGTGGAATCGGACCACTACTACAGAATT
CAGTCAATCGGTTTATCAGAAAAGAAAGGAGCGGAAGTGGATAGGAACGTGATTTACTTA
AGACCAGACTACAATCCGTTCTCATGCTACGTGGAAGCCAGGCATATAGAAGGTGACGTG
TTCACGGCCATCTGTCCCTCGGGGTGCGACCACTTTGCTGACAGAACCTGGGGATCTGGG
GTTTACAAGGACGATTCTTGCTTCTGTGCAGCAGCTATCCACGACGGAATTATATCAGCT
GAGCTCGGGGGTGCTGTTACTGTGCGAAAGATTGAAGGAAAATCTTCCTATACCGGTAAT
ATTCGAAACGGAATTGCAACGAAATCGTATGGATCGTGGAATGGATCATTTATATTTCAG
AATGCTGGAAAAGCGCGAAGGCCAACTTATGATGTTACGTGCGACGTACCAGCTAACTGG
ATTAAAGACACTGATTTCAATGTGGTTTGTCCGAATGGTTGCGACGTAATGACGGAGCGG
ATATGGGGTACCGGAGTTTACACTGACGACTCGTACATTTGTACCGCTGCTATTCACAAC
GATAAAATAAAAGGATCGAAAGGCGGAGAAGTCCACGTAATAAAGACAGGACAACAAACT
CAATTCATCGGAACAGAGAAAAACAAAATTGCAAGCAAAGATAAACTTAGCTCTTATGAT
TCATTCAAGTTCGAAGGTATTGAAGGAAAATCGTCTACAACTATCGAAGTATCTTGCTAT
TATCGAGTGGACCATCTTGAAGAAGAGGTTTTTACGGTCATATGCCCACCAGGATGCGAC
TCTATATCGGATCAGGTGTACGGAACTGGAATTTATACCCAAGATTCGTTCCTCTGCGCA
AGTGCCATACACGCAAAGAGAATTCACGCACCCATGGGCGGAATGGTCACAGTGATGAAA
ACCCACGGAAAAATCAGATTCTTGGGGAGTCTAAGCAATGGAATCGCATCAAAGGACGCT
CATAATCAAAGTTTGACATCGTTCATCTTTCAAGGATCGTGTGATATGCGCGGAGATCAC
TTGAAAAACGACGTCGCTACTTTTATGTGCGACCGCAACTGCGATGAAGAATCGTACGAA
GTGTGGGGCTCTGATACTTACAAGTCGAAGTCGCACGTTTGTGCAGCAGCAGCTCATGCT
GGAATAATCAGTGTATCCCTCGGTGGACCTGTTACAGTCAGAAAGGTTCCTGGTCTAGGG
TACTACACAGGCACGACGAAACAAAGAATTATAAGCAAATCCTCCGCAGAGTCGAATACT
GCATTTGTGTTTGCCGACAACATTCAAAAAGTCGGATCTGTACTTGCAGTTACTTGTGAC
GTTACTGCCGATTTTATAAGCGACGATATGTTTTCGCTTAAATGCCCTCCGGGATGCGTA
AACGGGAAAACGAAGATTTGGGGAGACGGAATATACACCAGCGATTCGCCACTTTGCGCC
GCTGCCGTACATGCCGGAAAACTACAAGACTCTCTGGGTGGAAAAATAACCGTTCATAAG
ATTAAAGGCAAGGCCACCTACGGCCAAGCTCTGAGAAATGGAATTCAATCTTTTGAATAC
GGATCGTGGTCTAGCGCGTCGGTAGTTTTTCAAATTACGTGTGAGACAAGGGCAAATTTT
ATGGTGGACGAATTATTCACGGTCGTTTGTCCAGCAGGATGTGACGCGGTTGAAAATGAG
ATATGGGGCACGGCAATATACAGTGACGACTCTTACATATGTAGCGCTGCAATACATGAC
GGCAGATTGAATGCTGATGTCGGCGGACAAATAGCAGTTGGAAAAGTGCCCGGTATGTCT
GCATACGCTGGCAGTGATATGAATGGCGTTGAAAGCAGATCCAAAGAAAAGTGGAGGAAG
TCGTTTGTTTTCCAAGATGTTCTCTTACAGTTCATGTCATCGTTCACAGTTACGTGTGAC
GTAGAGGCGAACATGATATTGGACAATCAATTTTCAGTTATCTGTCCACCGAACTGCGAT
GTCGAAACTGAAAGGGTTTGGGGAACCGATGTATACACGCAAGATTCCTATATATGTGCG
GCGGCCATTCACGCTGGAAAAATACAAGCATCACCTGGCGGTCGCGTTACCGTGGTCACT
ACGAAAGCGGAATCCTTCACCGGAACAAATCGAAACGAAATATCGAGCAAGAGCTACGAC
AAGGCGACGAAGGCAATTAAATTTATGTGA
| SMART |
LCCL (IPR004043) - T[65-148] 1.6E-11 - T[170-253] 1.9E-9 - T[275-358] 7.3E-10 - T[370-453] 7.2E-11 - T[475-558] 8.1E-25 - T[570-653] 2.1E-20 - T[675-757] 1.1E-11 |
| Gene3D |
LCCL_sf (IPR036609) - T[65-161] 3.2E-25 - T[168-265] 3.7E-24 - T[272-370] 1.8E-23 - T[371-466] 1.5E-22 - T[472-568] 2.7E-25 - T[569-666] 1.5E-30 - T[672-769] 8.2E-27 |
| SUPERFAMILY |
LCCL_sf (IPR036609) - T[67-159] 7.98E-23 - T[169-264] 2.88E-23 - T[275-370] 6.8E-21 - T[370-464] 1.05E-21 - T[475-569] 1.7E-25 - T[569-664] 3.01E-27 - T[675-766] 1.44E-23 |
| Pfam |
LCCL (IPR004043) - T[74-157] 2.8E-18 - T[181-258] 1.2E-18 - T[283-363] 1.2E-16 - T[382-458] 5.4E-16 - T[487-564] 6.0E-18 - T[575-662] 1.0E-21 - T[684-763] 3.0E-20 |
| ProSiteProfiles |
LCCL (IPR004043) - T[85-157] 19.945 - T[168-262] 17.843 - T[273-367] 18.421 - T[374-462] 19.211 - T[473-567] 21.665 - T[568-662] 24.585 - T[673-746] 16.235 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRLD2_HUMAN | 36.313 % | 85.5 | 2.17E-17 |
| VITRN_HUMAN | 45.263 % | 87.8 | 7.66E-18 |