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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.213.v2....' > 
  2. Clone 'cima819818' > 
  3. Transcript 'KH2012:KH.C2.216.v1....' > 
  4. Clone 'ma105p17' > 
  5. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S60.g09018.01.t

Possible name(s)

GPATCH3; TFIP11

Gene model

Harore.CG.MTP2014.S60.g09018

Location

S60 [149,525 / 161,618]

Sequences

Amino acid sequence

Length: 660

>Harore.CG.MTP2014.S60.g09018.01.p
MNKSKQPKTETTEERELNCGVVRNIPGKFRSTDLRNFFSDFIERGKFKCFHYKHRPEVNK
NENDNKPRKLKTCCSVFEVVSDQVLSDFISAYNDTNWIDSDGNCLQERCIIRKIDLPRGN
QDKNNTEIDLLDAGNYLTKEEKDSRRRHAVSEEFSRNDLLALSEMRPPIHVMPRGNVGST
IKEFQKLINECQLPPKIIKKLGLKFPKTGSTRRYGNVPFKYRVFGSCKPVEGTSTYTAGG
DEVGQVSVGDDGKGSSESDEDNDTCEEWERHEALHNDVTSQGREKERLFEEKIELKWEKG
GSGLVFYTDAQFWAKEDGDFDEETADDWDVDMSEYYGEKGDLDARQFLQMRKEKRDGKAI
YDDSLHGELRPQMKRKAVRARSESPPNATKKRGQFERYTKGVGRKLLEKGGWVEGDPLGP
KVRSGAITDPIELEGQHPRLRKGLGYHGEKLLVKGEANNGSNPKRCRIKVPKAIQKNADT
GDKLARTETNFRGTRSVEPNASHSYHYPQFHFNLPFKFKERTKAMRKAAIPGTEDGIVIT
TSYDEPLDIDGDEGLLRSIHPTALKHRSRCLKTNERTNLRQSLSNDERILERASVSSQVS
QTASSCSINTSKLVRNDPSPYQNADHGNNTGVHTGSISSSNAVIHSTVKFVSGGVLRDNK

Nucleotide sequence

Length: 4,173

>Harore.CG.MTP2014.S60.g09018.01.t
ATTTTTTATATCGACAAATCATCATTAATAACGCTCAATATTCAATATTTGATACTTGAA
ATGTAGAATTCGAGTGATGAATAAATCCAAGCAGCCGAAGACAGAAACCACCGAAGAGCG
AGAACTGAACTGCGGCGTCGTGAGAAATATTCCAGGAAAGTTTCGATCGACTGATTTGAG
GAATTTTTTCTCGGATTTCATTGAGCGTGGGAAATTTAAATGTTTTCATTACAAACATAG
GCCGGAAGTGAATAAAAATGAAAATGACAATAAGCCAAGAAAATTAAAAACATGTTGCTC
CGTATTTGAAGTTGTTTCTGACCAGGTGTTGTCTGACTTTATATCGGCGTACAACGATAC
GAATTGGATTGATAGCGATGGAAATTGCTTGCAAGAACGCTGCATAATTCGTAAGATTGA
TTTGCCTCGTGGAAATCAGGATAAGAATAATACTGAGATAGATTTGCTTGATGCTGGAAA
TTACCTCACGAAGGAAGAAAAAGATTCTCGAAGACGACACGCAGTCTCTGAAGAATTCTC
CAGGAATGATCTTCTAGCGCTTTCAGAAATGCGTCCTCCGATCCATGTGATGCCCCGAGG
CAACGTCGGAAGCACGATTAAAGAATTTCAGAAATTGATCAATGAATGTCAGCTCCCTCC
CAAAATAATAAAGAAACTGGGTCTGAAATTCCCGAAAACAGGGAGCACCAGACGTTACGG
TAATGTTCCTTTCAAATATCGGGTCTTTGGAAGTTGCAAGCCTGTAGAAGGGACAAGTAC
ATATACAGCTGGTGGAGATGAAGTCGGACAAGTTTCTGTTGGTGATGATGGTAAGGGATC
TTCCGAGTCAGATGAAGATAATGATACTTGTGAGGAATGGGAAAGGCATGAGGCGTTACA
CAATGATGTTACTTCACAGGGAAGAGAAAAGGAACGATTGTTTGAGGAAAAAATAGAACT
CAAGTGGGAAAAAGGCGGAAGCGGGCTTGTGTTTTATACAGATGCACAATTTTGGGCCAA
AGAGGATGGAGATTTTGATGAGGAAACGGCAGATGATTGGGATGTTGATATGAGTGAATA
TTATGGAGAAAAAGGAGACTTGGATGCAAGGCAATTTCTTCAGATGCGAAAAGAGAAAAG
GGATGGAAAAGCAATATATGATGATTCTTTACACGGTGAATTGAGACCTCAAATGAAAAG
GAAAGCTGTTCGAGCTAGATCAGAAAGTCCACCAAACGCCACAAAGAAACGAGGACAATT
TGAGAGATATACAAAAGGAGTTGGTAGGAAACTATTAGAAAAAGGGGGCTGGGTTGAAGG
AGACCCACTGGGCCCCAAAGTTAGATCGGGAGCCATCACAGACCCTATTGAACTTGAGGG
TCAGCACCCCAGACTTCGAAAAGGTCTGGGTTATCATGGTGAAAAACTGTTGGTGAAGGG
AGAGGCAAATAACGGGTCTAATCCTAAGAGATGTAGAATAAAAGTGCCGAAAGCAATCCA
GAAAAACGCTGATACTGGAGACAAGTTAGCTCGAACAGAAACGAATTTCCGTGGTACTCG
ATCTGTCGAACCAAACGCGAGTCATTCCTATCATTACCCACAGTTTCATTTCAATTTACC
TTTTAAGTTTAAAGAAAGGACGAAAGCTATGCGTAAAGCTGCTATACCTGGAACCGAGGA
TGGTATTGTTATAACGACTTCCTACGATGAACCTTTGGATATTGATGGGGATGAAGGACT
ATTAAGATCAATTCATCCAACAGCTTTGAAACATAGATCTCGATGTCTCAAAACTAATGA
ACGTACAAACCTACGGCAGAGCTTATCAAATGATGAAAGAATATTGGAACGAGCCTCGGT
AAGTAGTCAAGTAAGTCAAACTGCAAGCAGTTGTTCGATTAACACTAGTAAGCTGGTCAG
AAATGATCCGAGTCCATATCAAAATGCAGATCATGGTAATAATACTGGTGTTCATACTGG
TAGTATATCTTCTAGCAATGCTGTGATCCATAGCACTGTTAAGTTTGTTTCTGGAGGAGT
ATTACGTGATAATAAGTAAACTTCTCCAGAAAACTGGTATCTCAATTTTGAATAAATGAT
TTTATTCAAAATTCGGGATGATTGTCCCCATCTTTTCTTTGCTTCGTGGTTGGATTACAG
CTACAGAGGTCTGCATGTATATATGAAGTTGATTATGTGCTGCCTTTGTAGTGAAGTATG
GTTATCTCCTGTTGTTATCTACATGAAAAGTGATTTGCCAATTTCTCTTGTATCTTGTCA
AATCCTATCTTTGCTTGGCTTGGATCAACATTCCGTCTTCACTTAACATCCCGCTTCCCA
AGAACCTTGAACCTATCCGGTTAAGTAAGGACCTATTGGTATTCTTAATAACGCATGGAA
CTTCATGAACACCTGGATCACCCCCACACCTCTTCCAACAGTGCACCCCCTCAGCACAGG
GCTTTTGAGATAAATATTAGCAGGAAGTGCAAAGGTTTTTCCTGTCTCTTTTTCTTGGAT
CACAGGAAATTCTTAGACCCCATTGGGCCTTGGTACAATGCAACCCTCTCTTGGATCCTC
TTCAAACCATCTTCTTTTCGTACTGGCTAAATTAGTAGGAATATTCAAATGGTAAATCCA
TAGTGATATAGAATCTATTACTGTGCTGTTTTTCGTACCGTTGGTTTATCTTAACCGACT
CATTTTTTTAGCTTCAGTAGATTGTTTCGTCAAATATGCCTATTAAGTATTCACTACTTT
ATTGATATCGTTTTTGCATATAATAGTAACTCCACAATCTTCAATGTTTTTTAATGTACG
ACACGGAGAATACATGTACTTGTATTATAACTTTTGCAATCGTAACTATCGTCTAACTAA
AAGAAAGAATTACTCATAATGTTTAGTGTCTGAACAATTAAAATAGAAACTATTCAAAGC
AGATTGCATGGTATCGAAGCTATACGTATTGAAGTTCTTGTATCTTGTTAAGCTCCCCAT
TCTGGGTGTATTTTAAAACTTTTTGCAATTGGTGCATTTGGTTTGGTGTACATAGACAAA
ACATTGTCGACTCTTCCTCGGTATGGATAGACCGGCATGTGATGCCATGTCTGAAATTCC
TTGCGTCGACCTCTGGTATTTGGGGATAGAAGTCTTAAATGACGACGATGTGCAGCTTTC
ATGAGTTCAGCAATCTTGTTGTCCATATTCGCGCGTTGAATATCTGGCAGTCCTTCTTGT
TCTTGTAAGGCTGAGACAATAGCTTTCAATCTAGCATCTCGTCCCCCTTGCATATTTCGG
TCTGGATGCGTTCCGCTTGGTCCTCCGAGCAATTTGCTTCCAGCAAGCGAACGAAAAAAT
TTCAACGCCGCATTTCTATCTGACTCAGACGCAGATTTCAGCCACTCCCGAACTGCTTTC
TTAGCATTTGGTTGTAATGTGTGTTCAAGTAATCTGTCTGCTTCCGAGTGACCATTTTGT
CGAAGTACCTTCTTTGCTAACTCCTCTTGTCCCGGATTAATCCGGAGCCATCGCTGGGCT
GCTGAATACGTCCGTGGTTCTAGTGACAGCACTGGACTACTAGCATTGCTGCTTCGACGA
ACGGGTGCGCTCTTAGCAATATTCGGAAGCTGTAAAGATTTCTCTTGCAAATGTTTCTGT
AAAGCAGCTCGCTTTTTCAACACTTCTGACATATGCTCTTGTTGCTCTGATTTGATTGGT
TCAAATTTTCCCTGTGGAGGCGCGAAATGCGTAGTTTGAGTTGCGCCGTGTTGTCGTCTC
AAAATTAATGTAGTTTTTATAACCGAATGTTATACAGTTAGTTGAATTTTAAAATGTCTT
TGACCAATACCGTGATATATGCGAGGCAGCCGACCTGCTTCTTTCCATATTAGCCAATAT
TGTTTCTCTTGAAGTAACGTCACGCGGGGAATATCTGCTGGGGACCTTCCAGTTCATGAA
TCCCTTGCTTGGCTGTGGATTATTTCTTCCCTCCAGTGGGTGCTCCAAAGGTAGTTCAAC
TTTTATATCTTCCGGAAATTGTCCCGATCCCCTGCCGTAGGAAGACATTCTGCTCTCGCG
CGCGTAAGGTCCGTCAGCCGGGAATACGTGATTTCTGTAATTTGTCTGGTCCTCTCAACT
TCGAGATAACGTGCTTTCACTGGATTTTTAAAG

InterProScan

SMART
G_patch_dom (IPR000467) - T[397-447] 5.0E-4
Pfam
G_patch_dom (IPR000467) - T[399-446] 9.1E-6
ProSiteProfiles
G_patch_dom (IPR000467) - T[399-449] 12.938

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GPTC3_HUMAN 42.916 % 340 2.41E-109