- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S61.g03659.01.t
Possible name(s)
TBX15; TBX18; TBX22
Gene model
Location
S61 [284,736 / 288,843]
Amino acid sequence
Length: 795
>Harore.CG.MTP2014.S61.g03659.01.p
MATTAQNSDLFDLASSSGSEFYSSADIIPNEQIPMTDPGYHETFSNSPDFDEFGRLPSPS
GTPCHKQVTQRRDSAEMFQNYREDNFVSVTTDVSGEIPTPNGEPNFSSLHALTGFSVENL
LSDRKTSKRSRSEDETQEPDSKRSLTADYGDINSFMQDFGQQIPQKSYQSSEGILSDVMG
STSPCFVYQASILANSDFYEDGLQSDQESSSTAPSYEQTFTRFPSTNTSASENYLPIDES
RTFDSLYLRHTAEETANIYENDDMTATAISQGYDDVKYSLNTTSDIDGYRHHIEDIGISR
QISDLEQQQNQYSDIYDHTRILPDHKILNQITGVDASHFPADNFFHNVQSYPTYDTQPSY
FIAAQQDENVQSFVPVNHSDEFQLQSSNQISRSYLLQEMYRQQTVSNTYYEQTNEQSQTQ
PISDLSDLSKVSQGGVRREGFKEERETSCRSNEDSEVIVISSNPASPDKQQNSYCHADSR
VILKQNVELSDLRCISLKDYASSVTLQLLGHELWHKFHKIGTEMIITKAGRRMFPSIKVS
ISGLIPQKRYIMVVDILLITNDTGVYPTFDNPVLSVRYLYSSSQWMAAGNITSPVPKRAY
VHPESPALGETWMRQTIVFDKMKLTNNETNNKGHIILHSMHKYQPRIHLIECEGNGVREC
ETITLTQCVDTSRDNVLTFIFPETQFTTVTAYQNQQITKLKIDKNPFAKGFRDTAKNCRP
QEPGRDASDNKMTHYYRTAAPVVTVSIEPDTSQHRFFVNSNNNMIVQGNSKQIDIIDGEQ
ISNQQDDGRSIKWSG
Nucleotide sequence
Length: 2,388
>Harore.CG.MTP2014.S61.g03659.01.t
ATGGCTACCACGGCGCAAAACAGCGATTTGTTCGATTTAGCGTCGTCTAGCGGATCAGAA
TTTTATTCATCTGCTGACATTATCCCCAACGAACAAATTCCTATGACTGATCCAGGATAT
CACGAAACCTTTTCGAATTCTCCAGATTTCGATGAATTCGGTCGCTTACCTTCGCCATCC
GGAACGCCCTGTCACAAACAAGTTACGCAGAGACGTGATTCAGCAGAAATGTTCCAGAAT
TATCGAGAAGACAATTTCGTCTCCGTGACAACAGACGTCAGCGGGGAAATTCCGACACCT
AACGGTGAGCCCAATTTCAGCTCACTGCATGCACTTACTGGATTTTCAGTCGAGAATTTG
CTCTCGGACAGAAAAACGAGTAAAAGATCAAGATCCGAAGACGAAACGCAAGAGCCGGAC
TCAAAAAGAAGCCTTACTGCAGATTACGGTGATATTAACAGTTTTATGCAAGATTTCGGC
CAACAAATCCCGCAAAAAAGTTACCAATCGTCGGAGGGAATATTGAGCGATGTTATGGGT
TCAACGAGCCCATGTTTTGTCTATCAAGCTTCGATTTTGGCAAATTCCGATTTCTATGAA
GACGGACTGCAGTCTGACCAAGAATCGAGCTCCACAGCGCCATCTTACGAGCAAACTTTT
ACGCGTTTTCCTAGCACGAACACATCTGCCAGTGAAAATTATTTACCAATTGACGAGTCA
CGGACGTTTGACAGTCTCTATCTACGACATACTGCGGAAGAAACAGCAAATATTTATGAA
AATGATGATATGACAGCGACGGCTATTTCCCAAGGGTACGATGACGTCAAATATTCGTTG
AACACTACGTCAGATATCGATGGTTATCGTCACCATATAGAAGATATCGGAATATCTCGC
CAAATTTCGGATCTAGAGCAGCAACAGAATCAATATTCGGACATTTATGACCATACCAGA
ATACTGCCGGATCACAAGATCTTGAACCAGATCACAGGAGTCGACGCGTCACACTTTCCT
GCCGATAATTTTTTTCATAATGTCCAATCGTATCCGACGTACGATACACAGCCCTCTTAT
TTCATTGCTGCGCAGCAAGATGAAAACGTTCAGTCATTCGTACCTGTCAATCACTCAGAT
GAATTTCAACTTCAATCAAGTAATCAGATCAGTCGGAGTTATTTGCTACAGGAAATGTAT
CGTCAGCAGACCGTTTCAAATACCTATTATGAACAAACAAACGAACAGTCTCAAACGCAG
CCAATCAGCGATCTTTCAGATCTTTCCAAAGTGTCCCAAGGGGGAGTTAGAAGAGAGGGA
TTCAAAGAGGAACGAGAGACTTCTTGTAGATCAAACGAAGACAGCGAAGTCATTGTTATA
TCGTCGAATCCTGCATCACCTGATAAGCAACAGAATTCCTACTGCCATGCTGATTCAAGA
GTAATTCTGAAGCAGAATGTAGAACTATCAGACCTAAGGTGTATTTCCCTAAAGGACTAC
GCAAGCTCTGTCACGCTTCAGTTGTTGGGTCACGAACTTTGGCATAAATTTCATAAGATT
GGAACAGAGATGATCATAACCAAAGCTGGAAGACGAATGTTTCCCTCGATCAAAGTCAGT
ATATCCGGTCTGATTCCACAGAAGAGATACATCATGGTTGTTGACATCCTCTTGATAACA
AACGATACAGGTGTGTACCCTACATTTGATAATCCAGTACTAAGTGTCAGATATCTTTAC
AGTAGTTCTCAATGGATGGCGGCAGGCAACATAACGAGTCCAGTTCCGAAACGTGCATAC
GTTCATCCAGAATCACCAGCGCTCGGAGAGACTTGGATGAGACAGACGATCGTGTTTGAT
AAAATGAAATTGACGAACAACGAAACCAACAATAAAGGACATATAATTCTCCATTCAATG
CACAAATATCAACCGAGGATTCATCTCATAGAATGCGAGGGAAATGGCGTGCGTGAATGC
GAGACGATTACGTTGACGCAGTGTGTGGATACGTCACGTGACAACGTGCTCACGTTCATA
TTCCCTGAGACACAATTCACAACGGTCACCGCGTACCAGAACCAGCAGATCACGAAGTTG
AAAATCGATAAAAATCCGTTCGCTAAAGGTTTCAGAGACACGGCAAAGAACTGCAGACCG
CAGGAACCGGGAAGAGACGCCTCTGATAATAAAATGACACATTATTACAGAACAGCAGCG
CCAGTAGTGACGGTCTCCATTGAACCAGATACTTCACAACATCGTTTCTTTGTCAATTCA
AATAACAACATGATTGTACAGGGGAATTCAAAACAAATTGATATAATTGATGGAGAACAA
ATTTCAAACCAGCAGGATGATGGAAGGTCGATAAAATGGAGTGGATGA
| PANTHER |
TF_T-box (IPR001699) - T[118-458] 7.3E-92 - T[471-765] 7.3E-92 |
| Gene3D |
T-box_sf (IPR036960) - T[494-713] 6.3E-77 |
| CDD |
TF_T-box (IPR001699) - T[503-717] 1.04E-98 |
| SMART |
TF_T-box (IPR001699) - T[503-718] 6.6E-88 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[504-715] 1.22E-62 |
| Pfam |
TF_T-box (IPR001699) - T[507-713] 9.7E-71 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[508-713] 66.682 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[513-532] . - T[601-619] . |
| PRINTS |
TF_T-box (IPR001699) - T[521-545] 5.7E-22 - T[684-697] 5.7E-22 - T[705-713] 5.7E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX18_HUMAN | 57.746 % | 261 | 3.23E-77 |
| TBX15_HUMAN | 51.02 % | 251 | 1.21E-73 |
| TBX22_HUMAN | 56.019 % | 244 | 5.92E-72 |