- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S62.g10621.01.t
Possible name(s)
ABCC1; ABCC4
Gene model
Location
S62 [3,657 / 13,067]
Amino acid sequence
Length: 1,254
>Harore.CG.MTP2014.S62.g10621.01.p
MQSVNASFDENAAMMDRKSTTQLKLQPNRLASAGILSRVLFWWMNPLFKEGRKKEITEGD
MYQLQHENESSVLSNHLEKNWISQLNKKKRNKNHKPSLLKAVAQTHISSYSFLVLYGCIL
ESCYIFIPLIIGGLVSYFEDIENTPIEHAYLNIAGLSVISIFVKIIEHYLLYLTSCTGWH
VRTACCSLMYKKMLRLSQKSLGLSSTGQVVNLGSNDVMRFDRALVLLPFMIIAPLEIVGI
TVILYISVGKAAIVGVTVCFALVMYHLFNGLINARVRAKVAVITDKRVGLMSEIIAGIRI
IKMYTWEKSYAMFISAVRKKEINNLMISGIVQSISGMLSRCSGRLGAFVTFVVAVYLGEE
LTVAKVFMTLAFFSDIALVLGLLLQGSITATAETIISLRRIQTFLLLDETEMKSEIENKG
ERPIVKLENFSGNWETEDDYRFSLKNISFTAEENSLVIIIGHVGSGKSSLLNSILKELPV
SVGNLVVRGKISYTNQTPWILPGTLRDNILLGELFDKKRYDAVVEACALLQDLELLPDGD
LTKIGDRGVNLSGGQKARISLARAAYNNGTDICLLDDPFASVDVAVGNFIFKQCICRLLK
NKIRIIVTHQLQFLKRADLILVMQEGKVTAQGSYQKLVEEGTNFTSLLKSDKNRVTSISS
KGSVFNSLRKRTLSSSATSISSQSIDSMSSNEEFFEVSDSTERKPSLIKEEEIETEQNEE
GSVSGSVYAHYFRIKDRAPHLLVYSFLLISAQVLVVISDWWIAAWTTKYAEYQTSLHSNN
SNLTSINDSFITISTSDANYSVIVEFDKNFYISVTAVLIAFSMVLTLLHNFLMYYLNLTS
GIHMHKRMFDTIMKATVRFFDTNSVGNVLNRFSKDMGQIDEQLPPLYMDLLGHEAQFSVC
CPQPYKVCQRYEHFMLKSILSKNSIQDRIYIAMTSVERVQQYYKITPETNVMNQEVLAPS
GWPKCGEITYDNVSFAYYKGGPTALTNIRFNIKAQEKVGIVGRTGAGKSSIIASLFRFSE
SILGEILIDGVPTKSLRLELLRNAISIIPQDPMLFTGTMRHNLDPFLMYEDKDIWNALEQ
VQLKDSFKSLPLKLDTKVSESGQNFSVGQCQLVCLARAILRQRKLLVIDEATANVDLRTD
RMIQKTIREKFKHCTVLTIAHRLDTIIDSDRVMVLNEGRIMEFDEPHTLLQNPESYFTAL
VESSGSSAKLRNMAEKTFDVKNVTDSVDHNQHLSLQSYLPSPATYEYLDLETGV
Nucleotide sequence
Length: 3,765
>Harore.CG.MTP2014.S62.g10621.01.t
ATGCAGTCGGTTAACGCAAGCTTCGACGAGAATGCTGCAATGATGGATAGGAAAAGCACA
ACTCAGTTGAAATTACAGCCTAATAGATTGGCTTCTGCGGGTATTTTGTCCCGTGTACTC
TTTTGGTGGATGAACCCTCTTTTTAAAGAGGGTAGGAAGAAAGAGATTACAGAGGGTGAC
ATGTATCAACTACAGCATGAAAATGAGTCATCCGTTCTCTCGAATCATTTGGAAAAAAAC
TGGATATCTCAATTGAACAAAAAGAAGAGAAATAAGAATCATAAGCCAAGCCTTTTGAAA
GCAGTTGCACAAACACATATTTCAAGTTATAGCTTTCTGGTTCTATATGGATGTATACTT
GAGTCTTGTTATATATTCATCCCGTTGATCATCGGAGGACTAGTAAGTTATTTCGAGGAC
ATTGAGAATACTCCGATTGAACATGCATACTTGAACATTGCCGGCCTGTCTGTAATATCG
ATCTTTGTGAAGATAATAGAGCATTATCTCTTATACTTAACATCATGTACCGGTTGGCAT
GTAAGAACTGCATGTTGCAGTCTGATGTACAAAAAAATGTTACGACTCAGTCAAAAATCT
CTCGGTCTAAGTTCAACAGGACAGGTGGTTAATCTGGGATCGAATGACGTTATGCGATTT
GATCGGGCACTGGTTTTATTACCTTTCATGATCATAGCACCCCTCGAAATAGTAGGAATT
ACTGTCATTCTTTATATATCCGTTGGCAAAGCAGCAATTGTAGGTGTGACTGTCTGCTTT
GCACTAGTGATGTATCATCTGTTTAATGGGCTGATCAATGCAAGAGTGAGAGCAAAGGTT
GCTGTCATCACTGATAAGCGTGTGGGACTGATGTCAGAAATCATAGCTGGTATACGAATC
ATTAAAATGTACACATGGGAAAAAAGTTACGCAATGTTTATTTCGGCCGTTCGAAAGAAG
GAAATTAATAACTTGATGATCAGTGGAATTGTGCAGAGCATTAGTGGGATGTTGTCTCGG
TGCTCGGGAAGGCTGGGAGCATTTGTAACATTTGTAGTGGCTGTCTATTTAGGAGAGGAA
CTTACAGTAGCAAAGGTTTTCATGACCCTTGCATTTTTCTCTGATATCGCACTGGTGTTG
GGATTGTTGCTGCAAGGTTCAATCACAGCCACAGCTGAAACAATAATATCTCTAAGGAGG
ATTCAGACTTTCCTATTGCTGGATGAAACTGAGATGAAATCAGAGATTGAGAATAAGGGA
GAAAGGCCTATCGTAAAGTTGGAAAACTTTTCTGGAAATTGGGAAACAGAAGATGATTAC
CGCTTTTCATTAAAAAACATATCCTTTACGGCTGAAGAAAATTCATTGGTCATTATCATC
GGTCATGTTGGATCTGGAAAATCCTCCCTCCTTAATTCCATCCTGAAAGAGCTTCCAGTG
AGTGTCGGCAACTTGGTTGTGCGCGGGAAGATTTCGTACACCAATCAAACACCTTGGATA
TTGCCTGGTACACTGCGAGATAATATTTTACTGGGAGAGCTATTTGATAAAAAGCGATAT
GATGCGGTTGTTGAGGCTTGTGCACTTCTACAGGATTTGGAACTGTTGCCCGATGGAGAT
CTCACTAAAATTGGAGATCGTGGTGTTAACCTCAGCGGTGGGCAAAAAGCTCGAATATCG
TTGGCGAGAGCAGCTTACAACAATGGCACTGATATTTGTTTACTGGATGACCCATTTGCA
TCAGTAGATGTTGCGGTCGGTAATTTTATATTCAAACAGTGCATTTGCAGATTGTTGAAG
AATAAGATTCGTATTATTGTGACACATCAGTTGCAGTTTTTGAAGCGAGCGGACCTGATT
CTGGTCATGCAAGAGGGAAAAGTTACTGCACAAGGCAGTTATCAGAAATTAGTGGAAGAA
GGAACAAATTTTACCTCACTGCTCAAGTCTGATAAAAATCGAGTTACCTCTATCAGTTCA
AAAGGTTCAGTGTTTAACAGCTTGAGAAAAAGAACTTTATCGTCGAGCGCAACAAGCATC
TCTTCGCAATCCATTGATTCTATGTCTTCTAATGAGGAATTCTTCGAGGTTTCAGATTCT
ACCGAGAGGAAGCCTTCACTAATCAAAGAAGAGGAGATAGAAACAGAGCAGAATGAAGAA
GGCTCTGTAAGTGGCTCTGTTTATGCACACTACTTTCGTATCAAGGATCGTGCACCTCAT
CTTCTTGTTTATAGTTTCCTTCTGATTTCTGCCCAAGTGCTTGTTGTGATTTCAGACTGG
TGGATTGCTGCATGGACCACCAAATATGCAGAATACCAAACATCTTTACATTCCAACAAC
TCCAATCTAACTTCAATCAATGATTCCTTCATCACAATAAGTACAAGCGATGCAAACTAT
TCTGTGATAGTTGAATTTGATAAGAATTTCTACATAAGTGTAACTGCTGTGCTCATCGCA
TTCTCAATGGTGTTAACATTGTTACATAATTTCCTGATGTACTATCTCAACCTAACAAGC
GGGATACACATGCACAAGCGGATGTTTGACACGATTATGAAAGCAACTGTTAGATTTTTT
GACACTAATTCTGTCGGCAATGTGCTAAACAGGTTTTCCAAAGATATGGGACAAATTGAT
GAACAGCTGCCCCCACTGTACATGGACTTACTAGGCCACGAAGCCCAGTTTTCAGTCTGC
TGTCCTCAACCCTACAAGGTTTGTCAACGATACGAGCATTTCATGCTGAAAAGTATTTTG
AGCAAGAATTCCATTCAAGACAGGATTTACATAGCGATGACATCAGTTGAAAGGGTTCAG
CAGTATTACAAAATCACTCCAGAAACGAATGTAATGAACCAGGAAGTACTTGCTCCTAGT
GGATGGCCAAAATGTGGTGAAATTACATATGACAATGTTTCTTTTGCATACTACAAAGGT
GGACCAACTGCATTAACGAACATCAGGTTCAATATAAAAGCACAGGAAAAGGTTGGCATA
GTTGGCAGAACCGGAGCAGGAAAGAGCTCTATTATCGCATCATTGTTTCGGTTTTCAGAG
TCGATCCTCGGGGAGATTTTAATTGATGGAGTTCCAACGAAATCTTTGAGACTTGAACTA
CTGAGAAATGCAATCTCTATAATACCTCAAGACCCAATGCTTTTTACTGGGACCATGCGA
CATAACTTGGATCCATTCCTTATGTATGAGGACAAGGATATATGGAATGCACTAGAACAG
GTTCAACTAAAAGATTCATTCAAGTCTCTACCATTGAAATTGGACACCAAGGTTTCAGAA
TCAGGGCAAAACTTCAGTGTTGGCCAATGTCAACTTGTTTGTTTGGCACGAGCTATACTG
AGACAAAGAAAACTACTGGTTATTGATGAAGCCACAGCGAACGTAGATCTTAGAACCGAT
CGAATGATTCAGAAGACAATACGGGAGAAATTTAAACATTGCACTGTGCTTACCATTGCC
CACAGGCTTGACACAATAATAGATTCGGACAGAGTTATGGTACTCAATGAAGGTAGAATT
ATGGAGTTTGACGAGCCTCATACCTTGCTGCAGAATCCCGAAAGCTATTTTACCGCTTTG
GTAGAAAGCAGCGGATCCTCGGCTAAGCTAAGAAATATGGCTGAAAAAACCTTTGATGTC
AAGAACGTCACTGACAGTGTGGACCACAATCAACACTTGTCTCTTCAGAGTTATCTTCCG
TCCCCTGCAACATATGAATACTTAGATTTGGAGACTGGTGTTTAG
| PANTHER |
ABCC4 (IPR030240) - T[25-891] 0.0 - T[932-1218] 0.0 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[88-403] 6.8E-12 - T[723-900] 9.6E-12 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[98-401] 7.98E-30 - T[741-891] 2.35E-15 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[112-392] 25.602 - T[746-891] 14.12 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[120-374] 2.9E-17 - T[742-885] 1.7E-14 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[425-650] 19.961 - T[968-1202] 18.454 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[426-649] 2.13E-49 - T[962-1198] 1.6E-69 |
| Pfam |
ABC_transporter-like (IPR003439) - T[444-580] 7.5E-17 - T[985-1133] 2.6E-31 |
| SMART |
AAA+_ATPase (IPR003593) - T[453-629] 6.6E-9 - T[994-1179] 8.7E-11 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[551-565] . - T[1105-1119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 27.754 % | 355 | 4.12E-102 |
| MRP9_HUMAN | 27.481 % | 351 | 3.9E-101 |
| MRP4_HUMAN | 37.185 % | 610 | 0 |