Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S630.g08673.01.t

Possible name(s)

PDSS1; PDSS2

Gene model

Harore.CG.MTP2014.S630.g08673

Location

S630 [7,991 / 8,651]

Sequences

Amino acid sequence

Length: 219

>Harore.CG.MTP2014.S630.g08673.01.p
MAVLGGDFLLANACTGLAQLNNPKVVDLIASSIADISSSLIMLPETGTHCSSNNFKTIPG
TVDEWAKLIHLSHGSLLSNACVAAMILLNTNNEFKVAAETFAKHLVLAQQIQHDILRFHS
VETLIQQPNFSALCALPVVILSEKYDGKEWLDNFIKSISDSKYEIDLPSLHKTVSSDKHA
METAKELSILHADLALKSIDEFPGSDAKSALKNIVLSIR

Nucleotide sequence

Length: 660

>Harore.CG.MTP2014.S630.g08673.01.t
ATGGCAGTCTTAGGAGGAGATTTCCTTCTTGCCAATGCATGTACCGGACTAGCACAACTA
AATAACCCCAAAGTAGTTGATTTAATAGCCTCTTCCATAGCAGATATTTCAAGTTCTTTG
ATAATGCTCCCAGAAACTGGAACACATTGTAGCAGTAATAACTTTAAAACAATTCCTGGG
ACTGTGGATGAATGGGCAAAATTAATTCATTTGTCCCATGGAAGTCTACTTTCGAATGCC
TGTGTAGCAGCCATGATATTATTAAATACAAACAACGAGTTTAAAGTTGCTGCAGAAACA
TTCGCAAAACATTTAGTGTTGGCTCAACAGATTCAGCATGACATACTACGATTTCACTCA
GTTGAAACCTTAATTCAACAGCCAAATTTCTCTGCCTTGTGTGCTTTGCCTGTAGTCATA
CTTTCAGAAAAATATGATGGGAAAGAGTGGCTTGATAATTTCATCAAATCAATAAGTGAC
TCAAAGTATGAAATAGATTTGCCTTCTTTACATAAAACTGTGTCCAGTGACAAACATGCA
ATGGAAACTGCAAAGGAATTGAGTATATTGCATGCAGATTTAGCACTGAAATCTATAGAT
GAATTTCCAGGGAGTGATGCTAAAAGTGCTCTTAAGAACATAGTTTTATCAATTCGATAA

InterProScan

Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[1-218] 9.6E-25
SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[1-216] 9.59E-18
Pfam	Polyprenyl_synt (IPR000092) - T[2-128] 6.0E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DLP1_HUMAN	34.545 %	109	3.16E-28