Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S630.g08673.02.t

Possible name(s)

PDSS1; PDSS2

Gene model

Harore.CG.MTP2014.S630.g08673

Location

S630 [7,991 / 9,200]

Sequences

Amino acid sequence

Length: 402

>Harore.CG.MTP2014.S630.g08673.02.p
MLRKISSTAIFSPRLWKIRVLMRKCQYNRKISVFSTSDPSNGNNDAWQKAVSEGEKIVGF
PTSFISLRALLSNEFGGLAIHLSKLVSTKHPLLKTARGIVFDSKHYLQTRGLIVLLFSKA
VEPALEQDGPNYTAADIYKQQRTLAEITELVHIALLVHRGLVDVEDITKCQTVSKKDLKF
GNKMAVLGGDFLLANACTGLAQLNNPKVVDLIASSIADISSSLIMLPETGTHCSSNNFKT
IPGTVDEWAKLIHLSHGSLLSNACVAAMILLNTNNEFKVAAETFAKHLVLAQQIQHDILR
FHSVETLIQQPNFSALCALPVVILSEKYDGKEWLDNFIKSISDSKYEIDLPSLHKTVSSD
KHAMETAKELSILHADLALKSIDEFPGSDAKSALKNIVLSIR

Nucleotide sequence

Length: 1,209

>Harore.CG.MTP2014.S630.g08673.02.t
ATGCTTAGGAAAATTTCATCAACGGCAATTTTCTCACCAAGGCTTTGGAAAATACGAGTA
TTGATGAGGAAATGTCAGTACAATCGAAAGATCAGCGTGTTTTCTACTTCAGACCCAAGC
AACGGGAATAATGATGCTTGGCAGAAAGCTGTTTCCGAGGGTGAAAAAATCGTTGGATTT
CCTACGTCTTTTATAAGCTTGCGGGCTCTTTTGAGCAACGAATTCGGTGGGCTCGCTATT
CACCTCAGTAAACTTGTTAGCACCAAACATCCTTTATTAAAAACGGCAAGAGGAATTGTG
TTTGATTCCAAACACTATCTACAAACAAGAGGCCTCATTGTGTTATTGTTTTCTAAAGCG
GTTGAGCCTGCCCTTGAACAAGATGGCCCTAATTATACAGCAGCAGATATTTATAAGCAA
CAGAGAACATTAGCTGAAATAACTGAGCTTGTTCATATTGCTCTACTGGTACACAGAGGT
TTGGTAGATGTTGAAGATATAACAAAATGTCAGACTGTATCAAAGAAAGACTTGAAATTT
GGAAATAAAATGGCAGTCTTAGGAGGAGATTTCCTTCTTGCCAATGCATGTACCGGACTA
GCACAACTAAATAACCCCAAAGTAGTTGATTTAATAGCCTCTTCCATAGCAGATATTTCA
AGTTCTTTGATAATGCTCCCAGAAACTGGAACACATTGTAGCAGTAATAACTTTAAAACA
ATTCCTGGGACTGTGGATGAATGGGCAAAATTAATTCATTTGTCCCATGGAAGTCTACTT
TCGAATGCCTGTGTAGCAGCCATGATATTATTAAATACAAACAACGAGTTTAAAGTTGCT
GCAGAAACATTCGCAAAACATTTAGTGTTGGCTCAACAGATTCAGCATGACATACTACGA
TTTCACTCAGTTGAAACCTTAATTCAACAGCCAAATTTCTCTGCCTTGTGTGCTTTGCCT
GTAGTCATACTTTCAGAAAAATATGATGGGAAAGAGTGGCTTGATAATTTCATCAAATCA
ATAAGTGACTCAAAGTATGAAATAGATTTGCCTTCTTTACATAAAACTGTGTCCAGTGAC
AAACATGCAATGGAAACTGCAAAGGAATTGAGTATATTGCATGCAGATTTAGCACTGAAA
TCTATAGATGAATTTCCAGGGAGTGATGCTAAAAGTGCTCTTAAGAACATAGTTTTATCA
ATTCGATAA

InterProScan

SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[57-399] 4.56E-32
Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[63-401] 3.5E-47
Pfam	Polyprenyl_synt (IPR000092) - T[108-311] 2.5E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DLP1_HUMAN	41.979 %	253	7.63E-81