- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Transcript 'KH2012:KH.C3.88.v1.A...' >
- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S631.g09021.01.t
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
S631 [10,848 / 12,384]
Amino acid sequence
Length: 511
>Harore.CG.MTP2014.S631.g09021.01.p
MFSAPGELMPSARYPPYQPTYTAASINNAYTNGAVSAAISLPAYSNPTAAAIPNPMNQGF
SAGGINYINHPGMPHAAAVSSPINVTGIAGQYAPMTPNMAISPNMALVPGSMAHRQDKPY
RRNYTHAKPPYSYISLITMAIQSSESKMMTLSEIYGWIMDLFPFYRQNQQRWQNSIRHSL
SFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKCEKKAAMKASQDGER
KPSVDQGIVDNESAGIVAMEVSNPENIPVHHQQGEIPNGSDNLDTKPNFETLQPPTTSIN
TASPENKLCNDTNEAQVTMTRVGQLHAVGSNEHNFTNFSHMMPNYQAYASGLPPHPHFIP
QTGFAMTTENGGQYVQMATASVKPDPQSFTHPFSINSLMNAGEQQGRDFRVYQEAMQQYY
PPMQPIGLPHVSVPNSNAIFQTLPASHASTTIGNIMQHNSTTSVSPQMETSSMTTLNGDR
SINGIASEVPYYPVAVTSMQNHIPEPPATLS
Nucleotide sequence
Length: 1,536
>Harore.CG.MTP2014.S631.g09021.01.t
ATGTTTTCTGCACCAGGTGAACTTATGCCTAGCGCAAGATACCCGCCATATCAGCCTACT
TACACTGCGGCTAGCATTAACAATGCTTATACAAATGGAGCCGTTAGCGCAGCGATTTCC
CTGCCTGCTTACAGCAATCCTACGGCGGCAGCCATACCAAATCCTATGAACCAAGGATTT
TCTGCTGGAGGTATCAATTACATAAATCATCCTGGAATGCCTCATGCTGCAGCAGTTTCA
TCACCGATAAATGTTACTGGAATTGCTGGACAGTACGCACCTATGACCCCGAACATGGCA
ATAAGTCCTAATATGGCTCTCGTGCCAGGTTCAATGGCACATCGGCAAGACAAACCCTAT
CGTAGAAATTACACTCATGCCAAGCCACCATATAGTTATATATCACTGATAACTATGGCT
ATTCAGTCGAGTGAATCGAAAATGATGACACTGAGTGAAATCTATGGATGGATAATGGAT
TTATTTCCCTTCTACAGACAGAATCAACAAAGGTGGCAAAACTCGATTCGGCATAGTTTA
TCCTTCAATGACTGTTTCGTGAAGGTGCCCAGATCCCCTGATAAACCAGGCAAGGGATCC
TATTGGTCACTTCATCCAGATGCTGGGAACATGTTCGAAAATGGCTGTTATTTAAGAAGG
CAAAAGAGATTCAAGTGCGAAAAGAAGGCAGCTATGAAAGCTTCACAGGATGGAGAACGG
AAACCAAGTGTTGACCAAGGTATAGTGGATAATGAATCAGCTGGCATAGTGGCGATGGAA
GTGTCAAATCCCGAGAATATTCCTGTTCATCATCAGCAAGGTGAAATACCTAATGGTTCT
GATAATTTGGATACCAAACCAAACTTTGAAACGCTCCAACCACCAACCACAAGCATTAAT
ACGGCATCCCCTGAAAATAAACTGTGCAATGATACCAATGAAGCCCAAGTTACCATGACT
AGGGTTGGTCAGCTACATGCAGTTGGGAGCAATGAGCATAATTTTACTAATTTTTCACAT
ATGATGCCGAACTACCAAGCCTACGCCAGTGGACTTCCACCTCATCCACATTTCATACCA
CAAACCGGATTTGCTATGACCACTGAAAATGGTGGTCAATACGTCCAAATGGCGACGGCT
TCAGTTAAGCCTGATCCTCAGTCTTTCACCCATCCATTTTCAATAAATAGCTTGATGAAC
GCAGGTGAACAGCAGGGTCGAGATTTCAGGGTGTACCAGGAAGCAATGCAACAGTACTAT
CCTCCAATGCAACCAATTGGATTGCCTCACGTATCGGTACCCAATTCTAACGCTATATTT
CAAACCTTACCTGCATCCCACGCTTCTACGACTATTGGGAACATCATGCAGCACAATTCG
ACAACCTCAGTTTCTCCTCAAATGGAAACCTCAAGCATGACAACACTCAATGGCGATAGA
TCTATTAACGGTATTGCCTCGGAGGTACCATACTACCCAGTGGCAGTTACATCAATGCAA
AATCATATACCGGAACCTCCAGCTACACTATCATAA
| Pfam |
Fork-head_N (IPR013638) - T[18-127] 5.6E-6 |
| SMART |
Fork_head_dom (IPR001766) - T[126-216] 4.9E-60 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[126-227] 2.1E-46 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[127-222] 5.44E-40 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[128-141] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[128-141] 2.4E-23 - T[149-166] 2.4E-23 - T[172-189] 2.4E-23 |
| Pfam |
Fork_head_dom (IPR001766) - T[128-212] 2.7E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[128-205] 4.7185E-50 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[128-222] 39.012 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[172-178] . |
| Pfam |
Forkhead_box_C (IPR018533) - T[391-449] 4.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 76.19 % | 214 | 6.26E-65 |
| FOXA2_HUMAN | 86.555 % | 238 | 5.63E-73 |
| FOXA1_HUMAN | 56.054 % | 234 | 2.17E-71 |