Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S63.g10812.01.t

Possible name(s)

Harore.CG.MTP2014.S63.g10812

Gene model

Harore.CG.MTP2014.S63.g10812

Location

S63 [209,200 / 213,195]

Sequences

Amino acid sequence

Length: 461

>Harore.CG.MTP2014.S63.g10812.01.p
MAKLQQEVEEKMKILSGNTDAGFEALDYLGNKLFTKYIADQKKIVEICEKMIGCKLLDVF
SSIWDKYFTSGCYEYESEISAKMLLALKVLFWNYSDKCKTLCERISKSKEIIPRLLEDLK
QVDDTELSKDYKRHHVKATLAILHNLLRHCKSNKKVICENEGKQTILRFNKSEYLIVKTY
VAIVLAYCLENDEMDQLGLDLEVCKFILKLLSSASESGNHVGVYCLTSQELMDGMHNLAS
TDKNKKLFFDAGVMTLLLRILKRLSEDELVAVLHCLNRLIRLPDVTANEDMRNNIKSAVK
SLNGQGEIKQLRDQILFYLKENPTPIGKHVMISYQWNFQEQMLQVCEYLEKEGFTVWMDK
NNMADKISNTLAKAIDEAQVVLAAISSSYERSKNCESEYKHASQQNRPILPVKVERGYNP
KGWLSMKMGDEIYVDISQGVSEEKLKEIKERLLKKGATVRG

Nucleotide sequence

Length: 1,470

>Harore.CG.MTP2014.S63.g10812.01.t
AGTTCGAAATTCTGTTGTAAAGTTAAATTGGATCTGTGGAAAACATGGCTAAGCTACAAC
AAGAAGTTGAAGAGAAAATGAAGATTTTAAGTGGCAACACAGATGCAGGGTTTGAAGCAC
TCGATTATCTTGGAAATAAGCTCTTCACGAAGTACATTGCTGATCAAAAGAAAATTGTGG
AAATATGTGAGAAAATGATTGGATGCAAACTTCTTGATGTTTTCTCATCAATTTGGGATA
AATACTTCACTTCAGGATGTTATGAGTACGAAAGTGAAATTTCAGCAAAGATGTTATTAG
CGCTCAAAGTACTTTTCTGGAATTACTCGGACAAATGCAAAACACTATGCGAGAGGATTT
CTAAGAGCAAAGAAATAATTCCTAGATTACTGGAGGATTTGAAACAAGTGGATGACACCG
AGCTATCGAAAGATTATAAAAGGCATCATGTGAAGGCTACATTGGCAATCCTCCACAATC
TACTTAGACACTGCAAGAGCAACAAGAAGGTTATATGTGAGAATGAGGGAAAACAAACCA
TCCTTCGTTTTAACAAATCCGAGTACCTGATAGTCAAAACATATGTCGCGATTGTTCTAG
CATATTGTTTGGAAAATGATGAAATGGACCAGCTTGGACTTGACCTTGAAGTTTGCAAAT
TTATTTTGAAATTGCTAAGCTCTGCATCGGAATCGGGAAATCATGTAGGGGTATACTGCT
TGACATCTCAAGAATTAATGGATGGCATGCACAACCTTGCTAGCACTGATAAAAATAAGA
AACTCTTTTTTGATGCCGGAGTCATGACTCTGCTGCTCCGTATTCTGAAGCGCCTTTCAG
AAGATGAACTGGTTGCAGTGCTCCACTGTTTAAATCGATTGATAAGGTTACCTGATGTCA
CGGCCAACGAAGACATGAGGAACAATATTAAAAGTGCTGTTAAATCGCTCAATGGACAGG
GCGAAATTAAACAACTCAGAGATCAAATATTATTTTATTTGAAAGAAAATCCAACTCCAA
TCGGAAAGCATGTGATGATAAGCTACCAATGGAATTTCCAAGAACAAATGTTGCAGGTTT
GCGAATATCTTGAGAAAGAAGGTTTTACTGTATGGATGGACAAAAATAACATGGCAGATA
AAATTTCTAACACATTGGCAAAGGCCATAGACGAAGCGCAAGTCGTTCTCGCAGCAATAT
CTTCGTCATATGAAAGAAGCAAAAACTGTGAAAGCGAATATAAACATGCATCTCAACAAA
ACCGACCAATCCTACCAGTCAAAGTGGAGCGCGGTTACAATCCTAAAGGCTGGCTATCCA
TGAAGATGGGAGATGAGATATATGTTGATATTTCCCAAGGAGTTTCGGAAGAAAAACTCA
AAGAAATTAAAGAGCGCTTGCTAAAAAAGGGTGCCACTGTGCGTGGTTGAATACGTTTAG
TTGTTGTTATGTTTAAATTAGGAATGTCTT

InterProScan

Gene3D	ARM-like (IPR011989) - T[21-314] 8.5E-14
SUPERFAMILY	ARM-type_fold (IPR016024) - T[90-283] 1.55E-13
Gene3D	Toll_tir_struct_dom_sf (IPR035897) - T[328-453] 8.3E-14
SUPERFAMILY	Toll_tir_struct_dom_sf (IPR035897) - T[329-415] 2.09E-9
Pfam	TIR_dom (IPR000157) - T[330-425] 2.3E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value