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  1. Clone 'cima865255' > 
  2. Transcript 'KH2012:KH.L18.18.v4....' > 
  3. Transcript 'KH2012:KH.C9.317.v2....' > 
  4. Transcript 'Harore.CG.MTP2014.S1...' > 
  5. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S66.g04003.01.t

Possible name(s)

CARMIL1; CARMIL2; CARMIL3

Gene model

Harore.CG.MTP2014.S66.g04003

Location

S66 [90,068 / 121,986]

Sequences

Amino acid sequence

Length: 1,240

>Harore.CG.MTP2014.S66.g04003.01.p
MVVTLKKMIKLERSVGDRADPKVLTLTHDKCYIMGVKPPFKAEINFHFLDILSLDSPSYD
RLNISTSNGKIYFMRMIGSDDSDQIIGRIAMSLRTIFPGITLSKIVRASLEPLSRQKLIQ
SMLNQADLAESGPCGNFTMMYECLCNYLGLPVREEVGWDVDTIYLSQNCREINLKDFDLP
EQKDFIPIVSVLKYNRWFNGLVVRNVRLSNDVFEAILKVVGKSSTLSKLILEGVGMKGEF
AHRLSQEMVENKECCIEVLDLINNPIEDKAVMHLSGALPLIRHGAGLQTLKLDRTGLTAK
GLSGLCQALRSSISIGRSLTHLTLAGNLIRADEAVGLYNYLSNPNNLKILDMSGTDCAVE
IYISAMSKGCLDHLETIDLSKNHFFGKGTTSRHPHYLEDEYTGIRKGKETPLPNTFQEFF
KRTKALKSIDISGTRIPAEAVRQIMDGLGQNFTENLQVSLNLSSGEIKAAGAQMLGGSIG
NITNIVGLDISDNNLELEIPSLLAWIQQNRSITDLKIGRNFGSIKPKYMKIIMESIVQLM
QEEGSCLESLSLADSKLREWTTVILGCLGSNTSLTALDISGNLMGDSGARELAKALQINS
RIRLLVIDRNSLTATGFQEISSALEKNFTLRYMPYPVNDAVAAMKNQAEKTQSSLAHIQD
LLLRNANTNKDTNDQQFRLQRAVACTAQEVLDRVAEKVDDAVNALELLEADFSSSEVVVT
AKGLVKDAKNSKQLLSDIYGLGMEKTTGDHSHLRRKLNQMAKEMDAMIQDHIKNTVQSMT
KNAEAQCPYIFESISDGVKQHVEDKSSLPENFVRDHVMKQASTEIMNKVSELNLTVATLI
SDKVTDTLLAALSQCNTTLTEQLNKKKHERELAREEYKSPDSKEFKDDDVPDDLLKDEVE
DGSDKEPDDGKPKSPEHKAVKAVKSSDVLPAMRKERAASIAKRKQRPISTVAHDLDYKNK
SSATEATAHPIPVINEPADVLITVDQAKEQVETKGKDDDTNKLNSSTGGEPVYATVNKKR
KESETEKEEEDQEDTSTPKMLTDEKTTKEKSTDGSSDSMTEKGDDELLDFLPASTKKLEQ
VTKGRPRGPTKRRQARPAKPQTDTDNDVDDFFTASVASTDFDKVPTLSEEKEIAVEEEPK
KTPKRTPALGMFSITPDMLRKRKSHEPEKENDTTEEKSSEEKEGNAEEKNGEKNEEDIGN
EKPKSEGIRKKPPGAMGLPGMGFGGDVMAELRLKKLNKSK

Nucleotide sequence

Length: 4,382

>Harore.CG.MTP2014.S66.g04003.01.t
AGTGTAGCAATATTGCGAATACTCTTGTTATCGTGAAATAGATTCCACTGGCGTTAATAC
TGGATTAAGGAAGGGAATCAGAGAAAAATGAGCGACTGGGAAGAGGACGCGGATGAGATT
ACTACCTTTGAAAGCGAACATGATATACAATCTTCGCCAGATAAGCCTGGAAAGCGCAAG
AATCGCAGAAGCAATAAGCTGGCAGTCAATACAAATACATCTGACACAATTAGCTTGAGT
GGAACTTTGAAACGTGGCTTCAAAATGCCTTCTGAAGGTAGAGGCTTGAATAGCGCACTG
AAGCTCGGACTGAAATCGTCAGTTAGCGCGCACAGCAACAGCTTGAATCGGGGTGAGTCT
TTGCAGAACTTGGCGTACCAAGAGGACCCCAAATCAATGCAAAACAAGTGGTTTTCATTG
CGGAGAAAAAAGGAAGATGATACAATTAGTGTAGCAAGTGTTATGGGAACAAGATCACCA
AGAAGTCCACGAAGCCCAAATACAAGAGTGCCTTCCGACACATACGAGGATACTGTCAGT
ATGTTGGAGGGCTTGCTGTTTAATACTGAATCGCAACAAAATGAAGGTGAGGTTGAGAAT
CCACCATTTTATCGTAACCTCGATGCTGCGTGAAGGGAATACGGGACACCATTGGACGAA
AAATGGTTGTCACCCTGAAGAAGATGATCAAGCTTGAGAGAAGTGTTGGAGACAGGGCCG
ATCCCAAAGTCCTGACACTCACACATGACAAATGCTACATTATGGGTGTTAAACCTCCAT
TCAAGGCCGAAATCAACTTTCATTTTCTCGACATTCTATCGTTGGATAGTCCGTCCTATG
ACAGGCTTAACATTTCCACCTCCAATGGCAAGATTTATTTCATGCGAATGATTGGCTCAG
ATGATTCCGACCAAATCATTGGCCGCATTGCTATGTCGCTCAGAACAATTTTTCCAGGGA
TTACTTTATCAAAGATTGTCAGAGCTTCTCTGGAACCTTTAAGCCGGCAGAAGCTTATTC
AGTCGATGCTAAATCAGGCGGATTTGGCAGAATCTGGCCCGTGCGGAAACTTCACGATGA
TGTATGAATGTCTATGTAATTATCTCGGACTGCCGGTTCGTGAGGAAGTCGGTTGGGATG
TAGACACGATTTATTTGTCACAAAATTGCAGAGAAATTAATTTGAAGGACTTCGATCTTC
CCGAACAAAAAGATTTCATTCCAATCGTTTCTGTGCTGAAGTATAACCGTTGGTTCAATG
GACTGGTTGTCAGGAATGTTAGACTGAGCAATGATGTTTTTGAGGCAATTCTGAAGGTTG
TCGGGAAGTCGAGCACACTCAGCAAGCTTATACTAGAAGGAGTGGGAATGAAAGGAGAAT
TTGCTCATCGTCTCTCTCAGGAAATGGTAGAAAACAAAGAGTGTTGCATTGAAGTGCTAG
ATCTTATAAACAACCCTATCGAAGATAAAGCTGTAATGCACTTGAGCGGCGCTTTACCCT
TGATTAGGCACGGCGCCGGTTTGCAGACATTGAAGTTGGACAGAACAGGTCTCACTGCCA
AGGGCTTAAGCGGTCTTTGCCAAGCCCTGCGCTCCAGCATTTCTATCGGAAGGTCCCTCA
CACATCTTACCTTAGCAGGCAATCTTATAAGGGCAGACGAAGCAGTTGGTTTATACAATT
ACCTATCCAATCCAAACAATCTCAAAATCCTCGATATGTCAGGAACAGACTGTGCAGTTG
AAATTTATATAAGTGCAATGTCCAAAGGCTGCCTCGACCATTTGGAAACCATAGACCTGT
CAAAGAATCACTTTTTTGGAAAAGGCACCACCAGTCGTCATCCTCATTACTTGGAGGACG
AGTACACGGGCATCAGGAAGGGAAAAGAAACACCTTTACCTAATACATTCCAGGAGTTCT
TCAAGAGAACAAAAGCTTTGAAAAGCATAGACATTTCTGGAACGAGAATTCCTGCAGAAG
CCGTAAGGCAAATAATGGATGGATTGGGACAAAACTTCACTGAAAACCTACAAGTGTCTT
TGAACCTGAGCAGTGGAGAGATCAAAGCAGCAGGTGCACAGATGTTGGGAGGATCAATCG
GAAACATCACAAATATTGTCGGGTTAGATATTTCAGACAACAATCTAGAACTTGAGATAC
CGTCACTGCTTGCATGGATACAGCAAAACCGTTCAATAACGGATCTCAAAATTGGTCGTA
ACTTTGGTTCCATTAAACCGAAGTATATGAAAATTATTATGGAAAGCATTGTTCAACTCA
TGCAGGAAGAGGGATCTTGTCTTGAATCACTCTCCCTTGCTGATTCAAAGTTACGAGAAT
GGACAACTGTGATTTTGGGTTGTTTGGGAAGCAACACTTCGTTGACAGCTCTTGATATTA
GTGGGAATTTGATGGGAGATAGTGGAGCAAGAGAGCTGGCTAAGGCTCTTCAGATCAATT
CCAGAATTCGTTTACTAGTGATAGACCGCAACTCCCTCACTGCCACTGGATTTCAAGAGA
TTTCATCTGCACTTGAGAAGAATTTCACTCTGCGGTACATGCCATACCCTGTCAACGATG
CTGTTGCTGCTATGAAGAATCAGGCTGAAAAGACCCAGTCCTCGCTCGCCCACATACAAG
ATCTTTTACTGCGCAATGCGAATACAAACAAGGACACCAACGATCAACAGTTTAGACTGC
AACGTGCAGTTGCATGCACTGCCCAAGAAGTGTTGGATAGAGTTGCAGAGAAAGTTGATG
ATGCTGTTAATGCTCTTGAACTTCTGGAAGCAGATTTTTCAAGCAGTGAAGTCGTTGTCA
CAGCTAAGGGCCTTGTCAAGGACGCGAAAAATTCGAAACAACTGCTTTCCGACATATACG
GACTAGGTATGGAGAAGACGACGGGTGATCACAGTCATTTGCGAAGGAAACTGAATCAAA
TGGCGAAAGAGATGGATGCCATGATTCAAGATCACATTAAAAATACAGTCCAGTCAATGA
CCAAAAATGCTGAAGCTCAGTGTCCCTACATTTTCGAGAGTATAAGTGATGGAGTAAAGC
AACACGTCGAGGATAAAAGTTCTCTTCCTGAAAATTTCGTACGCGATCACGTGATGAAAC
AAGCGAGTACAGAAATCATGAACAAAGTCAGCGAACTTAATTTAACAGTGGCGACTTTGA
TATCGGACAAAGTTACTGACACGCTGCTGGCAGCTCTTTCACAATGTAACACAACCTTGA
CTGAGCAACTGAACAAAAAGAAGCATGAAAGAGAACTCGCTAGAGAAGAATACAAGAGTC
CTGACTCCAAAGAATTTAAAGATGATGATGTTCCTGATGATCTACTGAAAGACGAAGTGG
AAGATGGTAGCGATAAAGAACCGGACGATGGGAAACCCAAATCTCCCGAGCACAAAGCTG
TAAAAGCAGTCAAGTCCTCCGACGTGCTCCCAGCTATGCGGAAGGAAAGGGCTGCTAGCA
TTGCAAAACGCAAACAAAGGCCAATTTCGACCGTTGCTCACGATCTCGACTACAAGAATA
AGTCATCAGCAACTGAAGCCACTGCACACCCAATCCCAGTTATCAATGAACCTGCAGATG
TGTTGATCACAGTAGATCAAGCAAAAGAACAAGTGGAAACTAAAGGGAAAGATGATGATA
CTAATAAACTGAACAGTAGCACAGGCGGTGAACCCGTTTACGCTACGGTGAACAAAAAGA
GAAAAGAATCTGAAACTGAAAAGGAGGAAGAAGATCAGGAGGACACTTCGACACCCAAAA
TGCTCACGGATGAGAAAACCACAAAAGAAAAATCCACTGATGGTTCTTCAGACTCAATGA
CTGAAAAGGGCGATGATGAGCTGCTTGATTTTCTACCCGCTAGCACTAAAAAACTGGAAC
AGGTCACTAAAGGAAGGCCCAGGGGTCCAACCAAGCGGCGTCAAGCCAGACCTGCAAAAC
CTCAGACTGACACAGATAATGACGTTGATGATTTCTTCACTGCATCTGTTGCCAGCACTG
ATTTTGATAAAGTGCCAACGTTATCCGAAGAAAAGGAAATAGCTGTTGAGGAAGAACCAA
AAAAAACGCCAAAGCGAACGCCAGCCCTTGGAATGTTCAGTATAACACCAGATATGCTGC
GTAAAAGGAAGTCACATGAACCCGAAAAAGAAAATGATACCACAGAGGAAAAGAGTTCAG
AAGAGAAAGAAGGAAATGCAGAAGAGAAAAACGGTGAAAAGAATGAGGAAGATATTGGAA
ACGAAAAGCCGAAATCAGAAGGCATAAGAAAAAAACCTCCTGGTGCCATGGGTCTTCCTG
GTATGGGTTTCGGTGGCGATGTCATGGCTGAATTGCGTTTGAAAAAGTTGAACAAAAGCA
AG

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[1-93] 9.7E-15
PANTHER
CARMIL1 (IPR029764) - T[3-876] 1.0E-232 - T[985-1059] 1.0E-232 - T[1149-1235] 1.0E-232
Gene3D
LRR_dom_sf (IPR032675) - T[137-665] 2.7E-132
Pfam
Leu-rich_rpt (IPR001611) - T[570-593] 1.6E-4
Pfam
CARMIL_C (IPR031943) - T[783-1145] 2.5E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CARL1_HUMAN 39.07 % 650 0
CARL3_HUMAN 34 % 505 7.35E-157
CARL2_HUMAN 29.115 % 391 6.53E-115





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