- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S66.g13261.01.t
Possible name(s)
ZNF236; ZNF699; ZNF778
Gene model
Location
S66 [237,040 / 252,511]
Amino acid sequence
Length: 1,906
>Harore.CG.MTP2014.S66.g13261.01.p
MESNDHLPNDDELRSALYLAPCDNINMMNSYNVDTNSSLFQNKATQLEMIPGNTVTAISQ
LNNTQTMTVVQATNTVLDTTFSQLGNQMLPIGDGQLSVIESNGQQYLLLPSFSVVSDQIV
FPNQAPNQIPIRLGQQVDDTIPANDMVQRLEAERPTHTINSSHLPNENMPILASPTQKSN
QQNNLYVMERFPSSVVSPGPSPADELKFINGYQGKLSKHLEMLDIIPSLYHRTLPETSDE
IDPNTCEFCSFHSENKVEMEAHREKHRADTGSTLYDDSSKKLKVGGKRGRRGRSLSIKKK
KMPHMIKSTPVSEPRIVVPDLPATCSICSAHLSTLGQFKKHMKQHEKDKPYRCDECSETF
NKEHNLVLHKSLHAKDTEKYQCPECKKTFSRMAGLKMHITVHALEETFMCKECGDEFNLD
SELNTHIAEHRKDIARHLHDKGKGVSILIHTADEEEEPNDRPITVNIEQLPSEFNIRSNT
FQVHLPTDQNKNDVSKEKLKYRSTVDADGLIADCRTTGCHECKVCRKLFQRRSQLTRHMR
IHTGEKPYSCPVCQKCFNQKGAMQTHMSMHSGEKPFTCPHCPQSYAQRGNLKIHVMRVHS
TDSSMACFECQLCPCVFKKLGSLNAHMTKYHPNQDMVESDIVTSIINESEKSSDKEQLCE
TRNDEIQTLIQNVLNSSSNTDPASEQTNDIVHRALEDCGVGSTDINANSANFASVLEGQN
NIGENSTTNENDSSLINIEVHQNSTNHLSNANENTNIATSQEQIDAINGKIDTDIIGSFS
GRDRNSPPSMVYKQTVQSTRTNVSRSQGAPINHMWKVKRVDGIRWHQCMYCVKEFRKPSD
LVRHIRVHTLERPYKCKQCFRAFAVKSSLTTHTKTHLGIKAYRCMVCLKSFTTAGSLTVH
QRLHTGSKPFTCTHCDRKFRTTGHRTAHMQSHYRKSILAQTSQPKKVALKKTASSLRLQD
PLVITEAGLVPQPARDANNVLMQSNKERPFKCNTCSKAFKKSSHLKLHLRSHTGEKPYTC
VQCRRSFVSTGVLKAHMKTHLGISMYRCNECSQSFSTSGSLKRHGLAHSNSRPFMCPYCR
KWFKTVVNCRKHIKTHQNEVDMQEDNASRIQPVSSGLSIQTSALDNGTTVSGFPSVDDTL
ESSFMSDFSNSQDGVDSGLNQIDPNMVQNIRDLGHDHVVSNLQQSQQTYILTQGMNDINA
PAQISLEDLANLTAEMDQVGQGQISSQHNELPLFNLDMSPQHGLHSSVGQPLYADNLELL
ENVTSQSRASNLNKPLLQQTQTMSNESTMNIENTAQNVVTQDAGMRKVYFGGKSTKLKQM
IQCTGCEAIFKPDQFEEHSQNFENQEKDLPFVCSSCCHRFKFYHHLESHLKFHTVNSELV
YKCSTCGVGFNSKNIQEEHKKYHSHDASKSDSSSTPSSKQHAPSQPKKSSSPYAQTSRTR
SGFFKLTEEQSRILAQTNPNLHMTLSERVLLSAVAEKDRIVDTVVSKRGRHKELEMNGPL
HSNVCPHCPKSFRKKSDLIRHIRVHTGDRPFSCKQCGKSFSVKSILISHEKTHTGIKPFR
CHICDLMYATKTSLKVHMRLHTGGTPYKCPHCSLRFRTSGHRKHHMNSHNKNHASKTSSK
QQKINQLNVSTPEKLLQDSQEAPAPVMLSNLTLTLPEGLLSSGLLQTTDGLQFQLSGQNL
QLVTGTNTSGEAENITFQIDPSMFQQTVSNQVQNADVIRRVNYTQPETTGPAPNLVIQPI
TISDCFMREQSSETGMEHGNTSEINVAVPANLAHLTQQLFQSSPAGNSLNQEGSELTFSV
NNSGVFQILQQLLNNNPPISNNSSGSSINQEQNKQTQLKHSDSGGPQELTLTVNQEELLG
NHNLISSGTMQPFAFDLLTSVDSQTNPNQQFTLTLNESDILTSTSN
Nucleotide sequence
Length: 6,575
>Harore.CG.MTP2014.S66.g13261.01.t
AATGGATTCGCTATAGCCATTATAGATTACGTCACAACGGAGAAGAGATTTCTTGATTTA
TAACTCGAGATCCACCATCAAACAATTATAGAGCAGCAAATTGTTGATTTTCTATGCTTG
CTTATTCGTCATATTTTTTATATTTCCTCGCATAAAGTCGTGTTATAAAGAATCATTTGA
ATAAAAACGAACTAGAAAATGGAATCAAATGATCATTTGCCTAATGATGATGAATTGAGG
AGCGCACTATACCTGGCTCCGTGTGACAATATTAATATGATGAACTCCTATAATGTTGAT
ACTAACAGTAGTCTTTTCCAGAACAAAGCTACACAACTTGAAATGATCCCTGGCAACACT
GTCACTGCAATCAGCCAGCTTAACAACACCCAAACAATGACTGTCGTCCAAGCTACAAAT
ACTGTTCTCGATACAACTTTCTCCCAACTTGGAAATCAAATGTTGCCGATTGGAGACGGT
CAACTATCTGTAATAGAGAGTAACGGACAGCAATACCTTCTACTGCCAAGCTTCTCTGTA
GTGTCGGATCAAATCGTCTTTCCCAATCAGGCTCCCAATCAGATTCCGATAAGGCTTGGG
CAACAAGTTGATGACACAATTCCAGCTAATGATATGGTACAGAGGCTGGAAGCAGAGCGA
CCAACTCATACTATTAACTCGTCACATCTGCCAAACGAAAATATGCCCATTCTTGCCTCT
CCTACTCAGAAGTCAAATCAGCAAAACAATCTCTATGTGATGGAACGTTTTCCATCTTCT
GTTGTTTCTCCCGGGCCATCTCCAGCCGATGAATTGAAGTTCATAAACGGATACCAGGGC
AAACTCAGCAAACATCTAGAAATGTTAGACATCATACCATCTCTGTATCACCGAACCTTA
CCAGAAACCTCTGATGAGATAGATCCAAATACGTGTGAATTTTGTTCCTTCCACTCTGAA
AATAAAGTTGAGATGGAAGCCCACAGAGAAAAACACAGAGCTGACACCGGAAGTACTTTG
TATGATGACTCGAGTAAAAAATTGAAAGTGGGCGGTAAACGAGGGAGAAGAGGAAGATCG
TTAAGCATTAAAAAGAAAAAAATGCCACACATGATAAAATCCACTCCAGTATCTGAACCA
CGCATTGTTGTTCCTGATCTTCCGGCAACTTGTAGTATTTGCAGCGCGCATTTGAGCACG
CTTGGTCAGTTCAAAAAACATATGAAGCAACATGAGAAAGACAAACCATACAGATGTGAT
GAATGCAGTGAAACATTCAACAAAGAGCACAATCTTGTTCTACACAAGTCTCTCCATGCT
AAGGATACTGAAAAATACCAGTGTCCCGAATGTAAAAAGACATTCAGTAGAATGGCTGGA
CTCAAAATGCATATTACTGTACATGCTTTAGAGGAAACTTTCATGTGCAAGGAATGTGGT
GATGAATTCAATTTAGACTCTGAATTGAACACGCACATCGCAGAACACAGAAAGGATATA
GCTCGTCATCTACATGATAAAGGCAAAGGCGTTTCCATACTCATTCACACTGCAGATGAA
GAGGAAGAACCAAATGATAGACCTATCACTGTGAATATTGAACAACTGCCTAGTGAATTC
AACATACGATCGAACACGTTTCAAGTCCATCTGCCAACTGATCAAAACAAGAACGATGTT
TCTAAGGAGAAACTGAAATACCGCTCGACTGTAGATGCCGATGGATTGATCGCAGACTGC
AGAACCACAGGCTGCCACGAATGCAAAGTTTGTCGAAAATTGTTCCAGAGGAGAAGTCAG
TTAACACGTCATATGAGGATACACACAGGTGAAAAACCGTACAGTTGTCCTGTTTGTCAA
AAGTGCTTTAATCAGAAAGGTGCAATGCAGACACACATGTCCATGCATAGTGGAGAAAAA
CCTTTTACTTGCCCTCATTGTCCACAGTCCTATGCCCAACGTGGGAACTTAAAGATTCAT
GTGATGAGAGTGCATTCGACCGACAGCAGTATGGCTTGCTTCGAATGTCAACTCTGTCCT
TGCGTATTCAAAAAACTTGGGAGTTTGAATGCCCACATGACCAAATATCATCCTAATCAA
GATATGGTCGAATCTGACATTGTGACATCAATAATCAATGAAAGTGAGAAGTCATCAGAC
AAAGAACAGCTCTGTGAGACGAGAAACGATGAGATTCAAACTTTGATTCAGAATGTCTTA
AATAGTAGCAGCAATACAGATCCTGCTTCAGAACAGACAAACGACATAGTCCATCGTGCC
CTGGAGGACTGTGGAGTCGGTTCAACTGATATAAATGCAAATTCAGCTAACTTTGCTTCA
GTGTTGGAAGGGCAAAATAATATCGGAGAAAATTCTACCACAAATGAAAATGATTCCAGT
CTCATCAATATTGAAGTGCATCAAAATTCAACTAATCACCTCAGCAATGCAAATGAGAAT
ACGAATATTGCTACAAGCCAGGAACAGATTGATGCAATTAACGGGAAAATAGATACTGAC
ATTATCGGATCATTCAGTGGAAGAGATAGAAATAGTCCTCCGTCTATGGTCTACAAACAG
ACAGTACAATCAACCCGTACAAATGTATCACGATCTCAAGGAGCACCCATCAATCATATG
TGGAAAGTCAAACGAGTGGATGGAATAAGATGGCATCAGTGCATGTACTGTGTCAAGGAA
TTTCGCAAACCCAGTGACCTGGTTCGCCACATTCGTGTTCACACTCTTGAACGCCCGTAC
AAATGCAAGCAGTGCTTTCGTGCCTTTGCTGTCAAATCCTCTCTCACTACTCACACCAAA
ACCCATCTAGGAATCAAAGCTTATCGTTGTATGGTATGTTTGAAATCTTTCACGACTGCT
GGCAGTTTAACTGTTCATCAAAGGTTACATACCGGTTCCAAACCGTTCACGTGCACCCAC
TGCGACAGAAAGTTTCGAACTACCGGACATCGCACCGCTCATATGCAGTCTCATTACAGA
AAATCAATACTTGCTCAAACTTCGCAGCCGAAGAAAGTAGCTCTGAAGAAGACAGCGTCA
TCTCTACGCCTGCAAGATCCGCTTGTGATTACAGAAGCAGGTCTTGTGCCCCAACCAGCA
AGAGATGCAAACAATGTGCTTATGCAGAGCAATAAAGAGAGGCCTTTCAAATGTAACACA
TGCAGCAAAGCATTTAAAAAGTCAAGTCATCTCAAACTACATCTTAGATCACACACAGGT
GAAAAGCCCTATACATGTGTTCAATGCAGACGGTCATTTGTTTCGACAGGAGTTCTGAAA
GCTCATATGAAAACCCATTTAGGAATTAGCATGTATCGGTGCAATGAGTGCTCTCAATCT
TTCTCTACGAGCGGTTCTTTGAAACGACATGGCTTGGCTCATAGTAATTCTCGTCCTTTC
ATGTGTCCTTATTGTAGGAAATGGTTCAAAACTGTGGTGAATTGCAGAAAACACATTAAA
ACGCATCAAAATGAAGTTGACATGCAGGAAGACAACGCTTCTCGAATTCAACCAGTGTCG
TCCGGTTTGAGTATTCAAACTTCGGCATTGGATAACGGAACTACAGTTTCAGGCTTTCCT
TCAGTGGATGACACTTTAGAGAGTTCGTTCATGAGCGACTTCAGCAATTCTCAAGACGGT
GTAGACTCTGGTTTGAACCAGATTGATCCGAACATGGTGCAAAACATTCGTGACCTCGGC
CATGACCATGTAGTGTCAAATTTGCAACAGTCGCAGCAGACGTACATACTGACCCAGGGT
ATGAATGACATTAACGCTCCTGCTCAAATATCGTTAGAAGACTTGGCCAACTTGACAGCG
GAAATGGATCAAGTTGGTCAAGGACAAATCTCATCACAACATAACGAACTTCCTTTATTC
AACCTTGATATGTCACCACAGCATGGCTTGCATTCTTCAGTCGGTCAACCACTGTATGCA
GACAACCTTGAATTACTGGAAAACGTAACAAGTCAATCTCGAGCCTCGAATCTGAACAAA
CCCTTGCTGCAGCAAACACAAACTATGTCGAATGAGTCTACAATGAACATAGAAAATACT
GCACAGAATGTCGTTACACAAGATGCTGGAATGAGAAAGGTATATTTCGGAGGCAAATCA
ACAAAGCTCAAACAAATGATTCAATGCACGGGTTGTGAAGCAATTTTCAAACCAGATCAG
TTCGAAGAACACAGTCAAAACTTTGAAAACCAAGAAAAGGATTTACCGTTTGTGTGCAGC
TCATGCTGTCACCGATTCAAATTCTATCACCATCTCGAAAGTCATTTAAAATTCCATACT
GTGAACAGTGAACTTGTCTACAAATGTTCGACCTGCGGTGTAGGATTCAACAGCAAGAAC
ATTCAGGAAGAACACAAGAAATATCACAGCCACGATGCCTCAAAATCTGACTCTTCTTCT
ACACCAAGTTCAAAGCAACATGCTCCTTCACAACCCAAGAAATCCTCTTCGCCATATGCA
CAGACTAGTCGAACAAGATCTGGATTTTTCAAGTTGACGGAGGAACAAAGTCGTATTTTG
GCTCAAACCAACCCGAACTTACATATGACCTTATCAGAAAGGGTTTTACTTTCGGCAGTA
GCAGAAAAAGACAGAATTGTTGATACGGTTGTTTCCAAGAGAGGGAGGCATAAGGAACTT
GAAATGAATGGGCCATTACATTCCAATGTGTGTCCTCACTGCCCAAAAAGTTTCAGAAAG
AAAAGCGATTTGATCAGACATATAAGGGTGCATACTGGCGACAGACCATTCTCATGTAAA
CAATGTGGAAAGAGCTTTTCTGTCAAGTCAATCTTGATTTCTCATGAGAAAACACACACT
GGAATAAAGCCTTTCCGATGCCACATCTGCGATTTGATGTATGCAACAAAAACAAGTTTA
AAGGTACACATGAGACTTCATACAGGTGGCACACCATACAAATGTCCTCATTGTTCTTTG
AGATTCAGAACATCAGGACACAGAAAACATCACATGAATTCACATAACAAGAATCATGCG
TCCAAGACATCATCGAAACAGCAAAAAATCAATCAACTGAACGTTTCCACACCAGAAAAA
CTTCTACAGGATTCTCAGGAAGCACCGGCTCCTGTCATGCTTTCAAATCTAACTTTGACT
TTGCCTGAAGGGCTGTTAAGTTCAGGACTTTTGCAGACTACCGATGGACTACAGTTTCAG
TTGAGCGGACAGAACCTACAGCTTGTAACAGGAACTAATACATCCGGTGAAGCAGAAAAC
ATAACTTTCCAAATCGATCCTTCAATGTTCCAGCAAACAGTTAGCAATCAAGTGCAGAAT
GCAGATGTTATAAGGCGAGTGAATTACACTCAGCCGGAAACAACTGGACCAGCTCCAAAT
CTTGTTATCCAGCCAATCACCATCTCGGACTGCTTCATGAGGGAACAGTCATCAGAAACT
GGCATGGAACATGGAAATACATCGGAGATAAATGTTGCAGTCCCTGCGAATCTCGCACAT
CTCACACAACAGTTATTTCAATCGTCACCCGCAGGAAACAGTTTAAATCAAGAAGGATCG
GAATTGACATTTTCTGTTAACAATTCCGGAGTCTTTCAGATCTTACAGCAACTACTGAAC
AACAACCCTCCTATATCGAATAACTCCTCTGGTTCTTCAATAAACCAAGAGCAAAATAAG
CAGACGCAATTAAAGCATTCTGATTCAGGGGGTCCTCAAGAACTTACTTTAACAGTAAAT
CAGGAGGAACTTCTTGGAAATCATAATCTGATCAGCTCTGGTACCATGCAGCCGTTCGCG
TTCGATCTTCTGACTTCCGTTGACTCTCAAACGAATCCTAATCAACAGTTCACTTTAACT
CTGAATGAATCTGATATTTTGACGTCTACCTCCAATTAGTACATCAGTCCTCTCTAAATC
AATGGTTATTCACATAAGAAAACCAATACAGCTCCATGAATTCACATAACACATAGATAG
ATCAAACAGATTGCAATTGATTAGTTTACTGTGAGTACTACTAATCTTCTATACCGACTC
CACAAAGGCAAAAATTGGAATTATTTGTTGTGTAAGTTGTAATGTAATACATACAATACC
CATTTGATAGAATGATAATATGTGCAGGAATTATGCAAGTAGAAAGCAGACTATGAACTA
TCTAACTATCATGCAGAAAAAATGAAATGCCAAGTTTCAGAGGATGTCTACCGTAGACAT
TATTTTTATCTTCACTGGATTAACAGCCAACCTTGTGCCATCCAAATATTTATATCAGTG
TCGGTCCTCAATGAGTTTCTACCTTGACTACCTATCTACCTACCTAGATGATGAATGGAA
ACCAAAACTAACTGATCCTAATCTTGTCCCATTCAAAGTAATATTGTAATTGATCACCAT
CCAAGGACAGGTGTTTAAGTATACATCATCTTTGGTTATAAGCATTGCTAATGTTCACCA
ATAGTGACTGAGAATAATGAAATATAAACTGTTGTAAGAATGAGAAGTTTATTAATTCAT
AAAAAGAAAATCATTTCAACAATTTTTGCAAAAAT
| SMART |
Znf_C2H2_type (IPR013087) - T[244-266] 4.5 - T[323-345] 0.071 - T[351-373] 0.033 - T[380-402] 2.1E-4 - T[408-430] 0.23 - T[520-542] 0.0018 - T[548-570] 9.6E-5 - T[576-599] 0.0016 - T[608-631] 0.06 - T[826-848] 0.0038 - T[854-876] 0.051 - T[882-904] 0.0012 - T[910-932] 0.035 - T[990-1012] 0.009 - T[1018-1040] 0.005 - T[1046-1068] 0.12 - T[1074-1096] 0.0084 - T[1351-1373] 58.0 - T[1381-1403] 0.19 - T[1503-1525] 4.2E-4 - T[1531-1553] 0.013 - T[1559-1581] 0.0014 - T[1587-1609] 0.057 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[323-350] 9.452 - T[351-378] 11.884 - T[380-407] 12.736 - T[408-435] 10.429 - T[520-547] 16.56 - T[548-575] 14.711 - T[576-604] 10.492 - T[608-636] 9.12 - T[826-853] 14.066 - T[854-881] 13.131 - T[882-909] 15.293 - T[910-937] 9.827 - T[990-1017] 17.08 - T[1018-1045] 11.302 - T[1046-1073] 14.025 - T[1074-1101] 9.993 - T[1351-1378] 9.785 - T[1381-1408] 10.637 - T[1503-1530] 15.313 - T[1531-1558] 16.02 - T[1559-1586] 12.383 - T[1587-1614] 9.411 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[323-373] 2.18E-9 - T[379-430] 2.83E-11 - T[519-551] 4.23E-10 - T[542-594] 3.86E-16 - T[824-876] 1.97E-12 - T[862-919] 2.54E-16 - T[998-1055] 1.38E-16 - T[1045-1096] 1.51E-11 - T[1350-1403] 4.15E-5 - T[1511-1566] 1.16E-19 - T[1553-1605] 1.24E-12 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[325-345] . - T[353-373] . - T[382-402] . - T[410-430] . - T[522-542] . - T[550-570] . - T[578-599] . - T[610-631] . - T[828-848] . - T[856-876] . - T[884-904] . - T[912-932] . - T[992-1012] . - T[1020-1040] . - T[1048-1068] . - T[1076-1096] . - T[1353-1373] . - T[1383-1405] . - T[1505-1525] . - T[1533-1553] . - T[1561-1581] . - T[1589-1609] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN236_HUMAN | 54.762 % | 357 | 8.24E-100 |
| ZN699_HUMAN | 33.333 % | 194 | 8.41E-52 |
| ZN778_HUMAN | 35.806 % | 200 | 4.24E-53 |