- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C11.266.v1...' >
- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S672.g15167.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
S672 [0 / 3,433]
Amino acid sequence
Length: 166
>Harore.CG.MTP2014.S672.g15167.01.p
DSPLHFPSKYRTEPCTTYHTIGMCPYGEQCNFYHDLKEKNDHPNVTKTSRYKTRLCKTWQ
KAGECPYGVKCDFAHGTDDLILNSSSKPRYKTRMCKVLQQIGRCPYGAQCTFAHKQDELR
TDLSLIYKYKTEICNVWAMGLRCSHGSDCHFAHGREELKQESESVF
Nucleotide sequence
Length: 2,167
>Harore.CG.MTP2014.S672.g15167.01.t
GTGACTCACCATTACATTTTCCATCGAAATATCGCACAGAACCGTGTACAACTTATCATA
CTATTGGGATGTGTCCATACGGAGAGCAATGCAACTTCTATCATGATCTCAAAGAAAAAA
ATGATCATCCAAATGTAACCAAGACATCTAGGTACAAGACCCGTCTATGCAAAACATGGC
AAAAAGCTGGCGAATGTCCATATGGAGTGAAATGTGATTTTGCTCATGGAACTGATGATC
TGATCTTGAATTCTTCTTCGAAACCTCGTTACAAAACGCGAATGTGCAAAGTTCTACAAC
AGATCGGTCGATGTCCGTACGGTGCACAATGTACATTCGCTCATAAGCAGGATGAACTCA
GGACAGATTTGTCATTAATTTACAAGTATAAGACTGAGATCTGTAATGTATGGGCAATGG
GTTTGAGATGTTCTCATGGATCTGATTGTCATTTCGCTCACGGTAGAGAAGAACTGAAAC
AAGAGTCAGAATCTGTTTTTTGAACTTGATATCTGATCAGGTATTTCCAGTGGTGAATTT
CTAACAGAGATTTAATAAATTTTAGACATGTTCGAGACTAATTCGAAAAAATAGTTCAAA
TATTTCAACATAAGGAATTTCACAATTATTTCTTGGAAATAAGAAACTTATTTGTAAGCT
TAAAAAAATGAGGGATCGCTCCCTGAATCGATTTAAAAAACTGAGATGTTATGAGTAATA
TCAATGAATTATTTGAAGTTTAATTATGTTAATTTAATCAAACAATATATTTCACCAAAA
GTAGAAATTTTCAATTCCATCAATGAGATTTATTGAACTGAATTCATTTGAAATAGCGAA
GAAACCACTAACCCTCACTAAGTAATTTTAATCATCTCTGAAAGTAGTTCCAAGTATTTA
TAGTTCAAGTATATGAAAAAGAATTCAGTCATAAAAGTAAGGTCTGATTAATCAATTATT
ATATTTTTCAAGAGTTGAAATTCCCCATTTCATCAATGAGGTTTGTTTGAACTAAACTCA
TTTGAAATAGTTTGAGGCTCTTAAAGCACTTGACCGCTAAGTATATTTAAGTTAAGTGAG
TAACAGTATTCTCGGTGTACTGAATCAGAAAGTATATTTAAGTTATCACTATTGTGCGTG
TTTTCAGTCTTTTTTGCATTTGTATTTTATGTGTTTCCCTAAGTTTTCCATAGGTAATAA
TGATTAATCAATTAATGAATACTAATAATAGTAATGATTCAACTGATACTAAGTACTATT
CGTGATCTAGTACATTAAGTAACGGTAAAAAAGTAACGTTGGCTTGCAATACTATTTTCA
ACATGCACAATCCTTAACCACAAAACTTTCTACCAAATGTCAGAATGACATTCCCCTCTT
TTCAAGATTGCTGGACTTGAAAAGTACATTCCGAATACCATGTTTACCATTTAAGTTGAG
CAGACCACTGAAAAATTCTTAGAAATGCAAGTTCATACTAAATAATATTTATATGATACT
AAAATTTCTGATGAGGATTGCAATTAATGAAAACCATACAATTGTTTGTTCTTCACAAAT
TCTAAGATAGAGTGTCTCATCAATATATCAACAGTTTAACATCTGCTAATCTGTGATCCC
AATTCCTCCCCTGGTTGAGAACCTCTGTGTCAGAATTACTTGCAATATTCATCACAATTG
TAGCAGATGTAGCTACTTTATGGTGTGAAGTATTATATTATTATTATAAAGTTTGCTCAT
TGAGACAAATCAAACTCTTTATATCAGAATCAATGTTTGAGATTCCACTTCTTTGTTCTT
TGATTTTACACTGCTATAACTGAGAATGGATTTATCCATAGTTGAAATTATCCGAATGAT
CCAATGCTTATTCTATTTTGACAATCACCGTGTTCCTTTGTGTTGTGTTCCACCAAATCA
AATTGATATGTAAGTGCACTTATTACTTAGTTTTTGCAGATTTTGTACATCTTATTACAC
TGTGTTTATTGATTGATATGCCGCATAGTGCAGAAATGCATTATTTTCCATTGAAGCATT
ATTTCTTGAAAAAATAAGTTCCATTTTTTTGGAGAAGAAATTTCTCAAAGTTGCAATAAT
GAAATTTTTCGTGTTCCACGTTTTCGTCCGTCTTACATTTGTGTGTGATAATAATAAAAT
ATTGAAG
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[8-39] 3.01E-9 - T[46-80] 3.79E-10 - T[88-120] 3.27E-10 - T[127-159] 1.44E-9 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[9-37] 15.15 - T[50-78] 15.901 - T[89-117] 14.305 - T[128-156] 13.526 |
| SMART |
Znf_CCCH (IPR000571) - T[9-36] 5.9E-7 - T[50-77] 1.1E-7 - T[89-116] 0.0097 - T[128-155] 2.0E-5 |
| Pfam |
Znf_CCCH (IPR000571) - T[10-35] 6.1E-8 - T[51-76] 2.4E-11 - T[90-114] 3.5E-7 - T[129-155] 1.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 44.737 % | 74.3 | 2.52E-16 |
| TISD_HUMAN | 45.946 % | 75.5 | 1.88E-16 |