- Transcript 'Cisavi.CG.ENS81.R1.9...' >
- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S692.g10189.01.t
Possible name(s)
RDH13; RDH14
Gene model
Location
S692 [25,816 / 28,312]
Amino acid sequence
Length: 308
>Harore.CG.MTP2014.S692.g10189.01.p
MSFMNSKVFNRVIVPISFVSSLTGGILLLKEKRGGKRCPTKELMKDKICVITGANSGIGK
FTAEELARRGATVVIGCRHMGKCEEAAREIRRKTENAGVVCRFLDLASLDTVEEFSENLR
KEIPRIDVLINNAGVMKPRPPRTTPRTTDNFERQFGVNYLGHFLLTNLLLDKLSKSPSAR
VINLTSDAYAKGQLDLNDLDKSEMEDDDLKLTELYYQSKLAVVLFTDYLSRYFSTMTEYS
HITANCLNPGVTKTRIGRHAEAPLYAIGMQLYKPIQTILMRTPAQGAQTSIYLAVASDLK
DKSGGYFE
Nucleotide sequence
Length: 927
>Harore.CG.MTP2014.S692.g10189.01.t
ATGAGTTTTATGAATAGCAAAGTTTTCAATCGAGTTATTGTCCCTATCTCGTTTGTCTCG
TCGCTGACAGGTGGTATATTATTGCTCAAAGAAAAAAGAGGAGGGAAGAGATGTCCTACC
AAGGAGCTAATGAAAGATAAAATATGTGTCATTACCGGTGCAAATTCAGGAATTGGTAAA
TTTACAGCGGAGGAACTGGCAAGGCGAGGAGCGACAGTTGTCATTGGATGTCGTCACATG
GGAAAATGTGAAGAGGCTGCGAGAGAGATCCGGAGAAAAACAGAGAACGCCGGTGTGGTT
TGCAGGTTTCTTGATCTAGCTTCGCTCGACACAGTTGAGGAGTTCTCTGAAAATTTAAGG
AAAGAAATACCACGTATTGATGTCCTTATCAATAATGCTGGAGTAATGAAGCCCAGGCCA
CCGCGAACAACACCTCGGACTACCGATAACTTCGAAAGACAATTTGGAGTAAACTACTTA
GGTCATTTTCTACTTACGAATCTACTGTTGGATAAACTAAGCAAATCACCTTCAGCGAGA
GTAATCAATCTAACCTCGGATGCCTACGCTAAAGGACAGCTGGATCTGAATGACTTGGAT
AAGTCGGAAATGGAGGATGATGATTTGAAACTCACAGAACTTTATTACCAGAGCAAATTG
GCTGTGGTCTTGTTTACTGACTATTTATCAAGATACTTCTCTACTATGACAGAATATTCT
CATATTACCGCCAACTGCCTCAATCCTGGAGTTACAAAAACGCGAATAGGAAGACATGCA
GAAGCTCCTCTTTATGCTATTGGCATGCAGCTATATAAGCCTATTCAAACAATTTTGATG
AGAACTCCTGCACAAGGGGCCCAAACGAGTATATATTTAGCAGTGGCTTCAGATTTGAAA
GATAAGAGCGGTGGTTACTTTGAGTAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[44-298] 9.57E-52 |
| Pfam |
SDR_fam (IPR002347) - T[47-189] 4.5E-28 |
| PRINTS |
SDR_fam (IPR002347) - T[48-65] 7.6E-16 - T[124-135] 7.6E-16 - T[124-135] 3.3E-6 - T[173-189] 7.6E-16 - T[179-187] 3.3E-6 - T[215-234] 7.6E-16 - T[215-234] 3.3E-6 - T[240-257] 7.6E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH13_HUMAN | 46.667 % | 236 | 3.77E-76 |
| RDH14_HUMAN | 40.893 % | 186 | 4.63E-57 |
| RDH12_HUMAN | 40.876 % | 166 | 3.28E-49 |