- Transcript 'Boleac.CG.SB_v3.S164...' >
- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S692.g10189.02.t
Possible name(s)
RDH13; RDH14
Gene model
Location
S692 [25,163 / 28,381]
Amino acid sequence
Length: 394
>Harore.CG.MTP2014.S692.g10189.02.p
CSCSCSCFGSSKTRSSVSCCANVMSFMNSKVFNRVIVPISFVSSLTGGILLLKEKRGGKR
CPTKELMKDKICVITGANSGIGKFTAEELARRGATVVIGCRHMGKCEEAAREIRRKTENA
GVVCRFLDLASLDTVEEFSENLRKEIPRIDVLINNAGVMKPRPPRTTPRTTDNFERQFGV
NYLGHFLLTNLLLDKLSKSPSARVINLTSDAYAKGQLDLNDLDKSEMEDDDLKLTELYYQ
SKLAVVLFTDYLSRYFSTMTEYSHITANCLNPGVTKTRIGRHAEAPLYAIGMQLYKPIQT
ILMRTPAQGAQTSIYLAVASDLKDKSGGYFDDCNELNKTCNVCDSKQADDLWDMSEQWTD
VKNRLDRVRHGEMKHTSNGNNQAGDALRDTLHRK
Nucleotide sequence
Length: 1,463
>Harore.CG.MTP2014.S692.g10189.02.t
TGCTCATGCTCATGCTCATGCTTTGGTTCTAGTAAGACCAGAAGTTCGGTGAGTTGCTGT
GCTAACGTCATGAGTTTTATGAATAGCAAAGTTTTCAATCGAGTTATTGTCCCTATCTCG
TTTGTCTCGTCGCTGACAGGTGGTATATTATTGCTCAAAGAAAAAAGAGGAGGGAAGAGA
TGTCCTACCAAGGAGCTAATGAAAGATAAAATATGTGTCATTACCGGTGCAAATTCAGGA
ATTGGTAAATTTACAGCGGAGGAACTGGCAAGGCGAGGAGCGACAGTTGTCATTGGATGT
CGTCACATGGGAAAATGTGAAGAGGCTGCGAGAGAGATCCGGAGAAAAACAGAGAACGCC
GGTGTGGTTTGCAGGTTTCTTGATCTAGCTTCGCTCGACACAGTTGAGGAGTTCTCTGAA
AATTTAAGGAAAGAAATACCACGTATTGATGTCCTTATCAATAATGCTGGAGTAATGAAG
CCCAGGCCACCGCGAACAACACCTCGGACTACCGATAACTTCGAAAGACAATTTGGAGTA
AACTACTTAGGTCATTTTCTACTTACGAATCTACTGTTGGATAAACTAAGCAAATCACCT
TCAGCGAGAGTAATCAATCTAACCTCGGATGCCTACGCTAAAGGACAGCTGGATCTGAAT
GACTTGGATAAGTCGGAAATGGAGGATGATGATTTGAAACTCACAGAACTTTATTACCAG
AGCAAATTGGCTGTGGTCTTGTTTACTGACTATTTATCAAGATACTTCTCTACTATGACA
GAATATTCTCATATTACCGCCAACTGCCTCAATCCTGGAGTTACAAAAACGCGAATAGGA
AGACATGCAGAAGCTCCTCTTTATGCTATTGGCATGCAGCTATATAAGCCTATTCAAACA
ATTTTGATGAGAACTCCTGCACAAGGGGCCCAAACGAGTATATATTTAGCAGTGGCTTCA
GATTTGAAAGATAAGAGCGGTGGTTACTTTGACGACTGCAACGAACTGAACAAAACCTGC
AATGTATGCGATTCCAAACAAGCGGATGACCTCTGGGATATGAGTGAACAATGGACCGAT
GTTAAAAACAGACTCGATCGCGTGAGACATGGTGAAATGAAGCACACCTCTAATGGTAAT
AATCAAGCGGGAGATGCTCTCCGAGACACTTTGCATAGAAAATAAAACTCAGATGTGGGT
AATATTTGTTCATTTGTTACTTCAGCATTCAGTTTTACATTGGTATCTTCATGTACTGTA
ATATTCACTATTGTGTAGTAAAATATTGAAAACTGTACATTTGGTATATATAACATTATA
GTACCATATGTTCTAGTATATAATAACATTACGAGTGAGAAGAAATTTTTTGGGTGGAAA
ACCTATAGGGAAGAGTTTCAAAATTCATTACAGCAATACCTCGTAATACGTCGTGGGAAT
ATAGCAGGTAAGGATGCACACCA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[67-336] 2.72E-52 |
| Pfam |
SDR_fam (IPR002347) - T[70-212] 7.8E-28 |
| PRINTS |
SDR_fam (IPR002347) - T[71-88] 2.1E-15 - T[147-158] 2.1E-15 - T[147-158] 6.0E-6 - T[196-212] 2.1E-15 - T[202-210] 6.0E-6 - T[238-257] 2.1E-15 - T[238-257] 6.0E-6 - T[263-280] 2.1E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH13_HUMAN | 45.062 % | 241 | 5.36E-77 |
| RDH14_HUMAN | 40.694 % | 205 | 3.24E-63 |
| RDH12_HUMAN | 38.924 % | 179 | 2.08E-53 |