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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S69.g03672.01.t

Possible name(s)

RAC1; RAC2; RAC3

Location

S69 [180,342 / 184,973]

Sequences

Amino acid sequence

Length: 193

>Harore.CG.MTP2014.S69.g03672.01.p
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFVLCFSLVSPSSFENIRAKWHPEVSHHCPNTPLILVGTKIDLR
EDTETIEKLKEKRTSPISYPQGLNMAKDIRAVKYLECSALTQKGLKTVFDEAIRAVLCPA
VDKRKSKKSCVTL

Nucleotide sequence

Length: 1,888

>Harore.CG.MTP2014.S69.g03672.01.t
AGATTTTTTCTGTAATTAATTCTACTATATTATCTTGTAATCGTCACGGAAAGAAAACTG
TGTTAATATGCAGGCAATCAAATGTGTGGTAGTGGGAGACGGTGCTGTCGGTAAGACATG
TTTGCTGATCAGCTACACAACGAATGCTTTTCCAGGAGAATATATCCCGACAGTATTCGA
TAACTATTCCGCCAATGTAATGGTGGACGGGCGACCTGTTAATCTCGGTCTCTGGGATAC
GGCAGGTCAAGAAGACTACGACAGACTACGCCCTCTGTCATATCCACAAACTGACGTTTT
CGTTCTATGCTTCTCGCTCGTTTCTCCTTCATCGTTTGAAAACATAAGAGCGAAATGGCA
CCCAGAGGTATCCCATCACTGTCCCAACACCCCCCTCATCCTGGTAGGAACTAAGATAGA
TTTACGAGAGGATACAGAGACTATTGAGAAACTAAAAGAGAAGAGGACTAGTCCGATCTC
GTACCCACAAGGACTCAATATGGCGAAGGACATACGCGCTGTGAAATACTTAGAGTGTTC
AGCGTTAACCCAAAAAGGTCTGAAGACCGTCTTCGATGAAGCTATCAGAGCAGTCCTCTG
CCCAGCCGTTGACAAACGAAAGAGCAAAAAGTCTTGCGTCACCTTATAAACACTTATACA
GAACCATAGTCAATAACGTTTTTTTAAACTGAAGGCGCTACTGTGGCAGTTTTAAGCAGC
AATAGGCGCTGTTGCATATTTCAGGGAATAGTTTAGTTAAAAACCTCTAGCAAGAATCTT
ACTGGGGAACCACAATTTTCGCTAAGAATCAACGGTAAAAGACTTGTGAGGCAAATCTAT
TTAAGTTTTGAAGCGTCTGCATGACTTTTAAGAATTTGTTCTGTAAGCGATTATTTTTAT
AGTAAGGATTGGTTCGGTGTTATATATTATTACCTATAGTGGAATCCGTATATAGTAGAA
TTATATATATTACCATTCACTTATATGACCATACATGACATCTTGTTGGGAAGTAATTTC
TTGGCATTCTCTTCCATCCATTTCAAAGTTGATCAAATATTAGCTATTTCCCCATCTCCT
ATGATATAGTTTAACTTTCAAACACTTTTAAAGGAACTGCTTATCAGTACAGTTATCATA
CATCCTGACCATTGTCTACCCCAGAGGTACTCAACATTTTTTCCGTATTCCCCCCTACCA
ACCCCAAACGCTGGCATTTCCTCCCCAGACGCTCGATCAGTACAAAAAAACAAATAAACC
ACATATTTCCAAATCTTCATACAACTTTAATGAGAACACTTATCCTCGTGCTGAGATACT
AATAAAGAAATTTAAAAAAAGACCTAGAAACTATTGCCCAAATCCCTCCCCATTTCCTTC
TTTTGGCAAATTCCTCCCAGGAATTTCAAATTCCTCTTTAGGGAGCCAGTCGGATCCAGG
TTGAGAAGCACTGGTCTACCCCATAACCCAATCATTCTTACGACTGTCTGTCATATTCAC
ATTTCATATTCAGTATAAGAAGCTGTGGTCTGCTGTCTCTCAATATCGTGAAATTCGATA
CATATAGGCTACTGTTCCCAACACCAGGTATAACAGATCTAGCATATAATAAAACACAGT
GCCAAGGTGTTCATTTTATCCGGATTTTACTGTATATATTACATTGCTAGTGGACACTAT
TCGCTTCAGTAGCCAAACGACTCTATGTGACATTAGTAAATTTTACTTTTACTGTTTTCG
TCAGCTATAGCTTTAGCAATGTATAAACTATAGTTTAGCAATGCTATGAATATGAAAGAC
CTAGATGTAGGCTGATGATTTGTTATTTAATATCCGGATTTTTTCTTCTTCAATCGACAT
AATAAAACATAGAATGATTAAGTGTGAC

InterProScan

ProSiteProfiles
Small_GTPase_Rho (IPR003578) - T[1-176] 28.676
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[1-157] 1.6E-39
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[4-176] 6.74E-58
Pfam
Small_GTPase (IPR001806) - T[5-177] 2.5E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAC1_HUMAN 87.234 % 348 3.25E-124
RAC2_HUMAN 81.865 % 340 5.22E-121
RAC3_HUMAN 84.831 % 333 1.91E-118