- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S6.g08314.01.t
Possible name(s)
ZNF112; ZNF226; ZNF235
Gene model
Location
S6 [229,117 / 230,597]
Amino acid sequence
Length: 258
>Harore.CG.MTP2014.S6.g08314.01.p
MVLAAKSNSITTREVYSAFYNIVISNLELQVKMVINCEEISQRGNVVIHKKIHTTEKPFK
CDECGKSFSRQRPLKIHTSMYTNEKPYRCEICDKSFACRQYLGKHMVIHMEEKPFQCEIC
EKCFSRKNAKQSHVQSVHMKEKPHLCEICDKSFCLKENLKAHINIHLNIKKFECEICGKR
FFRGDSLKTHTVEHTKNKLFQCDVCPMKFSNFPLYKSHKKIMHSQINCKCSVCGNTFTSK
YDLKMHKEEHKGSDNKYH
Nucleotide sequence
Length: 777
>Harore.CG.MTP2014.S6.g08314.01.t
ATGGTTTTGGCGGCGAAATCGAATTCTATTACCACTAGAGAAGTATATTCTGCTTTCTAT
AATATAGTCATAAGTAATCTGGAACTGCAAGTAAAGATGGTGATAAATTGTGAAGAGATT
TCACAGAGAGGAAATGTGGTGATCCACAAGAAAATTCATACAACAGAAAAACCATTTAAA
TGTGATGAATGCGGTAAATCTTTTTCTCGCCAGCGTCCTTTGAAAATTCACACGAGTATG
TACACAAACGAAAAACCGTATCGATGTGAAATTTGCGATAAATCGTTTGCTTGCCGTCAA
TATTTAGGAAAACATATGGTAATCCACATGGAAGAAAAGCCTTTTCAGTGCGAAATATGT
GAGAAATGTTTTAGTCGAAAAAATGCAAAGCAATCACACGTACAAAGTGTGCATATGAAG
GAGAAACCGCATTTGTGTGAAATCTGTGATAAATCGTTTTGTTTGAAGGAAAACTTAAAA
GCACACATAAATATTCATCTGAATATAAAAAAGTTTGAATGTGAGATTTGTGGGAAACGT
TTTTTTCGGGGTGACTCTCTAAAAACCCACACAGTAGAACACACAAAGAATAAATTATTT
CAATGTGATGTGTGCCCTATGAAATTTTCAAATTTTCCACTTTACAAATCCCACAAGAAA
ATAATGCATAGTCAAATTAACTGCAAGTGTTCAGTATGTGGAAATACATTCACGTCAAAA
TATGATTTAAAGATGCATAAGGAAGAACATAAGGGATCTGACAATAAATATCATTAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[42-96] 1.9E-18 - T[95-153] 8.78E-17 - T[138-190] 6.1E-15 - T[198-250] 1.38E-9 |
| SMART |
Znf_C2H2_type (IPR013087) - T[59-79] 20.0 - T[87-109] 0.0042 - T[115-138] 0.0042 - T[144-166] 0.04 - T[172-194] 0.021 - T[200-223] 0.016 - T[228-250] 0.039 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[59-86] 14.42 - T[87-114] 13.9 - T[115-143] 12.799 - T[144-171] 10.741 - T[172-199] 12.196 - T[200-224] 8.559 - T[228-255] 10.845 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[89-109] . - T[117-138] . - T[146-166] . - T[174-194] . - T[202-223] . - T[228-250] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN226_HUMAN | 42.081 % | 175 | 3.09E-50 |
| ZN112_HUMAN | 38.942 % | 175 | 5.96E-50 |
| ZN235_HUMAN | 40.385 % | 170 | 1.94E-48 |