- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S708.g00359.01.t
Possible name(s)
DNAJC27; RAB13; RAB14
Gene model
Location
S708 [6,101 / 9,619]
Amino acid sequence
Length: 324
>Harore.CG.MTP2014.S708.g00359.01.p
MSTTNPNFISRKKGQPRSIRVKVISMGNTEAGKSCLIKRYCEKRFVNKYLATVGIDYGVT
KVQVKDKELKVNIFDMAGHPYFYEVRNEFYKDTQAALLVYDVTNRTSFDCLESWMTEMRN
EIGRPQRMDDVIFIVCANKIDKGKRAVDKTEGHLWAEAKGFQYFETSAATGEGVNEMFQA
LFDSLLEISESGGKKAPVNTNVGFTREQADAILRIKNGRDNYEKLGVHHTATREDVNKAY
RKLAVLLHPDKNIAPGSEDAFKLLVNARTASSEVTLLIFASHIPPPYSRPDSLHVIYYTL
TKRLYPGGQLTLSLPPLSLWYDNP
Nucleotide sequence
Length: 1,218
>Harore.CG.MTP2014.S708.g00359.01.t
AGGGGTTTATTTAAATATTCATAATGTCGACAACTAATCCTAATTTCATCAGTCGGAAGA
AAGGACAACCGAGAAGTATTCGTGTCAAAGTTATAAGTATGGGAAATACAGAAGCCGGTA
AAAGTTGTTTAATCAAGCGTTACTGCGAAAAAAGATTCGTCAACAAATATCTTGCGACCG
TTGGCATTGATTATGGTGTCACAAAAGTTCAAGTCAAAGATAAAGAATTAAAAGTTAATA
TTTTTGATATGGCCGGACATCCGTACTTTTATGAAGTCCGTAACGAATTTTACAAAGACA
CACAAGCTGCATTGTTGGTTTACGACGTCACGAATCGAACTAGCTTTGATTGTTTGGAAT
CGTGGATGACAGAAATGAGGAATGAAATCGGACGACCGCAACGAATGGACGATGTAATAT
TCATTGTTTGTGCCAACAAGATTGATAAAGGAAAAAGAGCTGTAGACAAAACAGAGGGAC
ATTTGTGGGCTGAAGCAAAAGGATTTCAATACTTTGAAACATCAGCAGCAACAGGTGAAG
GTGTCAATGAAATGTTTCAGGCATTGTTCGATTCTCTTCTTGAAATCTCGGAAAGTGGTG
GAAAGAAAGCTCCAGTCAACACGAATGTCGGTTTTACACGAGAGCAAGCTGACGCCATCT
TGAGGATAAAAAATGGACGCGATAATTACGAGAAGCTTGGTGTTCACCATACTGCTACAA
GAGAGGATGTCAACAAAGCGTACAGGAAGTTGGCCGTTCTTCTTCATCCTGATAAAAATA
TTGCTCCAGGAAGTGAGGATGCTTTCAAGTTGCTTGTTAACGCTAGAACAGCATCTTCGG
AAGTAACACTGTTAATATTTGCATCACATATTCCCCCACCCTACTCCAGGCCAGATTCCC
TGCATGTAATATATTACACCCTCACCAAGAGGCTATATCCAGGTGGACAATTAACCCTCT
CCTTACCTCCCCTTAGCCTATGGTATGATAACCCTTAGTGAAATTTTAACCACCTAGCAC
TTTTCAAGTGATATGAATTTATCCCTCTTCTGAAATTCTCATGGGCTTTCCCTATGCTAG
TGATTTTGACCACCTACTTTACTGAATAGAAAATTCTTATATTTTCAATTAGTTCCACTA
AAGCTATTTTACCTAACATTGGTTTGTTTCTTTTGTATACAAATTTTAAGTCACAAAATA
AAGACGCAACATTGCAAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[17-186] 1.32E-44 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[20-180] 1.1E-24 |
| Pfam |
Small_GTPase (IPR001806) - T[22-185] 3.6E-41 |
| Gene3D |
J_dom_sf (IPR036869) - T[197-274] 1.2E-18 |
| SUPERFAMILY |
J_dom_sf (IPR036869) - T[210-267] 3.4E-16 |
| SMART |
DnaJ_domain (IPR001623) - T[219-276] 1.5E-9 |
| ProSiteProfiles |
DnaJ_domain (IPR001623) - T[220-276] 11.198 |
| Pfam |
DnaJ_domain (IPR001623) - T[221-267] 1.5E-11 |
| CDD |
DnaJ_domain (IPR001623) - T[222-267] 1.52715E-13 |
| PRINTS |
DnaJ_domain (IPR001623) - T[222-240] 3.7E-7 - T[240-255] 3.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RAB13_HUMAN | 32.203 % | 108 | 2.13E-28 |
| DJC27_HUMAN | 66.284 % | 377 | 2.54E-132 |
| RAB14_HUMAN | 33.155 % | 108 | 2.66E-28 |