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TRANSCRIPT CARD

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  1. Molecular Tool 'Brachyury>Twist' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S70.g07546.01.t

Possible name(s)

DHCR7; LBR; TM7SF2

Gene model

Harore.CG.MTP2014.S70.g07546

Location

S70 [236,820 / 242,968]

Sequences

Amino acid sequence

Length: 630

>Harore.CG.MTP2014.S70.g07546.01.p
MRCSCRCVIVFGKRIQQIYKVSNRSMKIRFPVGEKVMAKWPGSALYFHAVVTKVTDEEGT
VEVRFEDGTDMELPAHYVSSESVFTKKKSPARRRSRSRSPGRSPARQKKLTSLKKDKEEK
EEVKKVKVTSEPVTYTTRRIRKYESEQKTNVHGVQQTINKSYKAEVVLERTESPSVQEMA
KQTKVKTKQMKSEKNEYREFGGPFGVFFMYLTVPILPLVVITSCSDNMCEVGKFTIDTIP
RKLKYYFDIESVLILLGFLLFHAIIYAIPFGYIADGPNTPSGKKTNYRISAFYTLFFTAV
AYSALIFYKFPVTIVYDKMLQIAAVTTVFCYLANILIHIKSFSAPPSELNPHASTGCTIY
DMFLGRELHPRFGKYFDLKLYLYRPAMTGWILVDLIYLQKELESTGAVRPLLVALTASQI
IYCIAVFFWDEEQCPYMFDVKNEGAGFLQVFGELVIVPFVYTIQPRYILEHHSAAKPSAT
IYALFGLFFLLGFILVIGSGYQKFRFRKNPYDPQMSGFESLPPSKKGGDRLLISGFWGFL
RHPNYLGEIIIGISWGLTMYNTYGFYCRIQPDCALGLRHVRHRYLVTSLFERRSKVQRKT
RLCMEGILQTSAVSHHTLCLLMFPDTDLLQ

Nucleotide sequence

Length: 3,315

>Harore.CG.MTP2014.S70.g07546.01.t
ATGCGTTGTTCTTGTCGCTGCGTGATAGTATTTGGCAAACGAATTCAGCAAATATATAAG
GTCAGTAACCGCAGCATGAAAATTCGGTTCCCTGTTGGAGAGAAAGTTATGGCGAAATGG
CCTGGAAGTGCGTTGTACTTCCACGCTGTTGTCACAAAAGTAACAGATGAAGAAGGAACA
GTAGAAGTTCGGTTTGAAGACGGTACTGATATGGAGCTACCAGCTCATTATGTATCGAGT
GAAAGTGTCTTCACGAAAAAGAAGTCTCCTGCTCGACGTAGATCTCGTTCCAGATCTCCT
GGTAGAAGCCCGGCTAGGCAAAAGAAGCTTACTAGTCTGAAAAAGGACAAGGAGGAGAAA
GAGGAGGTCAAGAAAGTAAAGGTTACATCTGAACCAGTGACCTATACCACTCGCAGGATA
AGGAAATACGAGTCGGAGCAAAAAACTAATGTGCATGGCGTGCAGCAGACCATTAACAAG
TCTTACAAGGCTGAAGTAGTTCTAGAGAGAACAGAGAGTCCTTCGGTGCAAGAAATGGCC
AAACAAACAAAGGTGAAAACCAAGCAGATGAAGTCGGAGAAAAATGAATACAGGGAATTT
GGTGGCCCATTTGGAGTCTTTTTTATGTACCTGACGGTTCCTATCCTGCCTCTTGTGGTC
ATCACTTCGTGTTCGGACAATATGTGTGAAGTAGGAAAGTTCACCATAGACACAATTCCT
CGGAAATTAAAGTACTACTTCGACATTGAATCGGTTTTGATACTGCTTGGCTTTTTGCTA
TTTCACGCCATCATCTACGCAATACCATTCGGGTACATTGCTGACGGACCTAACACTCCT
TCCGGGAAGAAAACCAACTACAGGATTAGTGCGTTCTACACTCTGTTCTTCACCGCAGTC
GCATACAGTGCTTTGATTTTCTACAAATTCCCGGTCACAATTGTGTATGACAAAATGTTG
CAAATTGCAGCTGTGACAACAGTGTTTTGTTACTTGGCAAATATCTTGATCCACATTAAG
TCTTTCTCTGCTCCTCCATCTGAACTGAACCCTCACGCCAGCACCGGATGCACGATTTAT
GACATGTTTCTTGGACGAGAACTCCATCCACGATTCGGAAAATACTTCGATTTGAAGTTG
TACTTGTACAGGCCTGCTATGACTGGCTGGATTTTGGTCGACCTCATTTATTTGCAAAAA
GAATTAGAATCGACCGGAGCAGTTCGACCATTGCTGGTTGCTTTGACAGCTTCACAAATC
ATCTATTGCATTGCAGTTTTTTTCTGGGATGAGGAACAATGCCCTTACATGTTTGATGTT
AAAAATGAAGGTGCGGGGTTTCTGCAGGTTTTTGGCGAACTGGTAATAGTACCGTTTGTG
TACACGATCCAGCCTCGTTACATCCTGGAACATCATTCCGCTGCTAAACCTTCAGCCACC
ATCTATGCTCTGTTTGGGCTGTTTTTCCTTCTTGGATTTATCCTTGTTATTGGATCAGGA
TACCAAAAATTCAGGTTCAGAAAAAACCCTTATGATCCACAGATGTCAGGTTTTGAAAGC
TTACCTCCATCTAAGAAAGGTGGAGACAGGCTTCTTATTTCTGGATTCTGGGGGTTCCTG
AGACATCCGAACTACCTCGGTGAAATTATCATTGGCATTTCGTGGGGACTTACCATGTAT
AATACTTATGGATTTTACTGCAGGATTCAACCAGATTGTGCCCTGGGTCTACGCCATGTT
CGTCACCGGTATCTTGTTACATCGCTCTTTGAGAGACGAAGTAAGGTGCAAAGAAAAACA
CGGTTATGCATGGAAGGAATACTGCAAACGAGTGCCGTATCGCATCATACCTTATGTCTT
TTAATGTTTCCTGACACAGACCTTCTTCAGTAAGGTGTAGTTTTCTGCCTTTACGATATT
CCAAAGAACTTGAATCATAGGTTCAATAAGATGAATCTTCTTTTATATTTTGTATCAACT
TCTGTCTCTTGTACTTTGGATGCAAGTGGAATTGTTTCGTTTTGCTCATTGGCAACAAGT
TCTTATGCTGGACTTAATTATCATATCTGCATAGAGCTTACCTACTAGAGGTAAATTTTT
ATGAAAAACATTCATTGAGTGTCTTTCAGTGTGTGGCCTTGAATGTTGTTATTCAAACTC
CACTATTCTTTACAATATACCCCACTATGAATTGAATGTATAGGGATTATTAGGCTGTCA
ACAAAGTATGGTACATTTAAATTAGGGGTTAGAATTGGTTAAAATCTAAAAGTTGGCTGA
TATTTTATACCTTGCTTACAATTTGTCTAATAAAGTACTATGAGATTTGTAAACATTTGT
GATCCCTCAATCACTTTGAATATGTAAGCTCTATTTTTGACTACTCCGTTTTACAATACA
TACATACATTAACAGATGCTCGATTACTTTTTACTTTCTCAAAACACTTTGAATTTGTCA
CTTAATTAATCTGCTAATGACAGGGTTATGAAGTGTTTTTCACTACACAGCTAGTGCCTT
AAGTGAACTTGTTTTAATGTCCCACTGAGGCCTTACATTAACCCTTATTAACCTCCGTAT
GTTGGTAAGCATCATATAATACAGAAACTGTAGCTCATGGACCTAAGCCCAGATAAGTAT
TTCAATACTGTATATGACAAAGAATGAACTGGGTGAAAATATTGAATGAATAATCACAAA
AATTTGTTAGTACATAGTGGTATGTTGATACCGAAAGCAAAGATAAAAGTCAATAATTCG
TTTATTTATCATCCAATGTAATTATGTTTTTACCCGTCCCCTACCTCCCAGTTAGGAAGT
GGTGTATAATAGGGAATATGTAACTTAAGTATGGAAACTTTGTAAGTACAATCCCACAGT
TTAAATCGCACTTCAAAAATTCTTCAAAAGTTTTCTTGTCTCGTTCACCTTGAAAGTTTT
GATCAAGATAGTTTATTGTCAAACCCATTCCAATGTAAATATTTTTTCTGTTCTAATTGC
ATGCTTTACTAAATTACAACTCGCACTGGACAATTGAGCCATTTGCTGCCAATTTCATGT
GCATGAATGAAATAGTATTGAACTACCTGAGGAGCCATCCATTACCATTATAAAACAAAC
CTGTAAAGTTCCGCTTCTATTGCAGCTAAACCCATTTCATGCAACTAATTAATCATTCAT
GAATATTTTCATTTGAAATGTTGTTATTTTCGTTTGATATACAGATAGTAAACTTGTCTG
TCGGAGCTGTTTTTTATATATTTTGAACATGCTCGGTGAGATCATTCAGTTTGTAATAAA
TAGATCCAAAAATAA

InterProScan

SMART
Tudor (IPR002999) - T[28-86] 7.8E-4
Pfam
Lamin-B_rcpt_of_tudor (IPR019023) - T[29-75] 1.6E-12
Pfam
Ergosterol_biosynth_ERG4_ERG24 (IPR001171) - T[195-559] 3.3E-60

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHCR7_HUMAN 28.333 % 107 1.51E-24
ERG24_HUMAN 33.557 % 183 1.19E-51
LBR_HUMAN 28.822 % 246 2.69E-73