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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R186...'
  2. Transcript 'KH2012:KH.C3.101.v1....'
  3. Clone 'cicl093d04'
  4. Clone 'cicl054p07'
  5. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S71.g02061.01.t

Possible name(s)

HSPBAP1; JMJD7; KDM8

Location

S71 [77,149 / 80,151]

Sequences

Amino acid sequence

Length: 537

>Harore.CG.MTP2014.S71.g02061.01.p
MNVGVLVTFTLNICVCMCVNQRNGHLKPLGSHKPPSIIIDEFTRENYPDPPTFFEKYVKP
SKAAIFRGAVIDSDAYKKWTDEYISENFGDMEVRLEAKSESTSWTPIGEKYLGRDTLRHF
VENYHNEDSYIVSDLPAPMYRDFGVIPSLGACGEMTKRFVEIDLWWSGGNTRSILHKDAY
NQLNCLLNGTKFWKIIEYKYEKFIHKHPEPGREIGGFSDINPEAVDLIKHPNISRTEWSN
FTLYAGDCLFLPKSDYHQVNSVGTQNLAVSILFGRFDGRESLDFSDCSEKTDMKRLKPLS
EFKVHWAWKGTGSFVMGRGDLEEQYRKGFLSLITRLNGEGLKCTLQHFITEFKLDPEDLV
YSHGDLSKAFNIIDKNRDNILNETEITSLTYFELQACAEEIEQYEPSATYEYEYSLVPYE
RVLEALKQKLQAKVLTRADWFEFYKKHLKGTEKFADEIFTRLCGSETKEVITSKEVTEKS
IQFALENWKYYWAPQYSDLENEPDEAIFHDIWNNEEVAYHEEDASKNSRILKNRNEL

Nucleotide sequence

Length: 1,614

>Harore.CG.MTP2014.S71.g02061.01.t
ATGAATGTTGGCGTTTTGGTAACATTTACGTTGAACATCTGTGTTTGTATGTGTGTGAAT
CAGCGTAATGGCCATCTGAAGCCCCTGGGATCGCATAAACCTCCTTCGATTATCATTGAC
GAATTCACGAGAGAAAATTATCCAGATCCTCCGACGTTTTTTGAGAAATACGTAAAACCC
AGCAAAGCTGCAATATTTCGTGGAGCGGTTATCGACAGCGACGCATACAAGAAATGGACA
GACGAATATATCAGTGAAAATTTCGGAGATATGGAAGTTAGATTAGAGGCAAAGTCGGAG
AGTACATCCTGGACACCGATCGGCGAAAAGTACTTGGGCCGCGATACACTGCGACATTTC
GTCGAGAATTATCATAACGAAGACTCGTATATTGTTTCCGACTTGCCCGCGCCTATGTAT
CGTGACTTTGGCGTGATTCCCTCGCTGGGTGCGTGTGGGGAGATGACCAAGCGATTCGTG
GAAATCGATTTATGGTGGAGTGGTGGAAACACCAGGAGTATTTTACACAAGGATGCTTAC
AATCAGTTAAATTGTCTTCTGAATGGAACAAAGTTTTGGAAAATTATCGAATACAAATAC
GAAAAATTCATACATAAGCATCCCGAGCCAGGCAGAGAAATTGGAGGGTTTTCAGACATC
AACCCTGAGGCTGTAGATTTAATTAAACATCCGAATATATCCAGAACAGAGTGGTCGAAT
TTTACCTTATATGCAGGAGATTGTCTTTTTCTACCCAAAAGTGATTACCATCAGGTAAAT
TCGGTAGGAACACAGAATCTTGCTGTTTCTATCTTATTCGGTAGATTTGATGGAAGAGAA
TCTCTGGACTTTTCTGACTGCAGTGAAAAAACAGATATGAAAAGATTGAAACCTCTAAGT
GAATTCAAAGTACATTGGGCATGGAAAGGAACCGGTTCGTTTGTCATGGGACGTGGTGAC
TTGGAAGAACAATACAGGAAGGGGTTTCTTTCGCTGATCACGCGTCTCAACGGAGAAGGA
TTAAAATGCACTCTGCAACATTTCATTACTGAATTTAAATTGGATCCAGAAGATCTGGTC
TACAGCCATGGTGATTTGAGTAAGGCATTCAACATCATTGATAAGAACAGGGATAATATT
TTGAATGAAACGGAAATAACGAGTTTGACATATTTTGAACTACAGGCCTGCGCAGAGGAG
ATTGAACAATATGAACCTTCAGCCACCTACGAATACGAGTATTCTCTCGTTCCGTACGAG
CGCGTGTTAGAAGCGTTGAAACAAAAACTGCAAGCAAAAGTTTTGACACGAGCAGACTGG
TTTGAATTCTACAAGAAACATTTGAAAGGTACAGAAAAGTTTGCTGATGAGATCTTCACA
CGACTTTGTGGATCCGAGACAAAGGAAGTCATTACGAGCAAAGAGGTTACAGAAAAAAGC
ATCCAGTTTGCTTTGGAAAACTGGAAATATTACTGGGCTCCACAATATTCAGATCTGGAA
AATGAGCCGGATGAAGCAATATTTCACGATATTTGGAATAACGAGGAGGTTGCCTACCAT
GAAGAAGATGCTTCGAAAAATAGCAGAATTCTGAAAAACAGAAATGAACTTTGA

InterProScan

ProSiteProfiles
JmjC_dom (IPR003347) - T[124-290] 17.435
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[374-386] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value