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  1. Transcript 'KH2012:KH.C5.191.v2....'
  2. Transcript 'KH2012:KH.L170.28.v5...'
  3. Transcript 'KH2012:KH.C6.192.v1....'
  4. Transcript 'Phfumi.CG.MTP2014.S3...'
  5. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S73.g08696.01.t

Possible name(s)

RDH11; RDH12; RDH13

Location

S73 [165,736 / 167,867]

Sequences

Amino acid sequence

Length: 410

>Harore.CG.MTP2014.S73.g08696.01.p
MHYSEGLVLYSYISHGECSLHIRENSSMLLELFTLLKYMRCSTTLSRVHKLSNVFIPPLS
TAIDQYVFNPLFSTLSAQICASTHSEVMTSSKQSASAKGGWVTSDVYLKEKSVLITGGNS
GIGFETAVDLARREATVIIACRDESKGENAVTEIRNITGSKTVFFKHLDLSSFQNIRKFA
KEFIDTETRLDILINNAGIMLCPQSTTEDGFETHFGVNHLGHFLLTNLLMDLLKKSSPSR
IITLSSVMHTELYNAYIHWDDLNLKKSYFPRDAYSQSKLMNVLFSRELSKRLTGTGVTTY
CVHPGLVRTNLLRHVGTNSSCWDFLFSFVTKTTRRFWKTPEHGAQTSIYCAIAPEIENVS
GKYYNTVLFQPYSDCHEETEARLGRDDDAAKRLWEITQEIISSVNIDEKD

Nucleotide sequence

Length: 1,233

>Harore.CG.MTP2014.S73.g08696.01.t
ATGCACTATAGTGAAGGTTTGGTACTTTACAGCTATATATCGCACGGGGAATGCTCGCTC
CATATTCGTGAGAACTCTTCTATGCTGCTTGAACTTTTTACCTTGCTGAAATACATGCGT
TGCAGTACTACATTAAGTAGAGTTCATAAACTCTCAAATGTTTTCATTCCTCCGTTGTCT
ACAGCTATTGATCAGTATGTGTTTAACCCACTCTTCTCTACGTTATCGGCACAAATATGT
GCATCTACGCACTCGGAAGTAATGACTAGCAGTAAACAATCAGCCTCGGCTAAAGGAGGA
TGGGTAACTAGCGATGTCTATTTAAAAGAAAAATCAGTTTTGATAACTGGAGGAAACTCG
GGAATCGGTTTTGAAACTGCTGTAGATTTAGCAAGGCGTGAAGCAACGGTCATAATAGCA
TGCCGTGACGAATCGAAAGGGGAAAATGCCGTAACTGAGATTCGAAACATAACTGGATCG
AAGACCGTTTTCTTCAAGCACTTGGACTTATCTTCGTTTCAAAATATTAGAAAATTTGCT
AAAGAATTCATTGATACGGAGACACGGCTAGATATTCTAATTAACAATGCAGGTATAATG
TTGTGCCCTCAGTCAACAACCGAAGATGGATTTGAAACACATTTCGGTGTAAATCATCTT
GGCCACTTTCTCTTGACCAATCTATTAATGGATTTATTAAAGAAAAGTTCGCCTAGTCGG
ATCATTACACTGTCGTCGGTTATGCATACCGAATTGTACAACGCTTATATACACTGGGAT
GACCTGAATTTGAAGAAATCTTATTTCCCAAGGGATGCATACAGTCAAAGCAAGCTGATG
AATGTATTGTTTTCAAGAGAACTGAGTAAACGATTGACCGGTACAGGTGTAACAACTTAC
TGCGTTCATCCGGGATTAGTGAGAACGAATCTCTTGCGGCATGTAGGAACAAACTCGTCT
TGCTGGGACTTCCTTTTCAGCTTTGTTACTAAAACCACGAGACGATTTTGGAAGACGCCA
GAACATGGAGCACAAACATCAATATATTGCGCAATTGCACCGGAGATAGAAAACGTTTCT
GGAAAATATTACAATACTGTACTGTTTCAACCATATAGTGATTGCCACGAAGAAACCGAA
GCTAGACTGGGTAGAGACGACGATGCAGCAAAGCGACTATGGGAAATCACCCAGGAGATT
ATTTCATCTGTGAATATAGATGAGAAGGATTAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[108-365] 8.99E-58
Pfam
SDR_fam (IPR002347) - T[111-250] 7.0E-27
PRINTS
SDR_fam (IPR002347) - T[112-129] 7.3E-16 - T[188-199] 7.3E-16 - T[188-199] 1.3E-5 - T[233-249] 7.3E-16 - T[239-247] 1.3E-5 - T[274-293] 7.3E-16 - T[274-293] 1.3E-5 - T[295-312] 7.3E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 47.195 % 259 6.39E-84
RDH13_HUMAN 47.078 % 254 4.77E-82
RDH12_HUMAN 49.013 % 262 2.27E-85





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