- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S75.g07902.01.t
Possible name(s)
CDC20; CDC20B; FZR1
Gene model
Location
S75 [14,812 / 19,890]
Amino acid sequence
Length: 582
>Harore.CG.MTP2014.S75.g07902.01.p
MKGFNKPLLVFELITIISLTMSSHFDFENELNNLVRLDVPINSGPTPRWRRKALEVPSCN
SSSLSLSMNTSPLKISNRSLSQCMNKTPSSGRTPSSARNKTPGKEKTPNKSVNKTPSRGD
RYIPNRQSTNFELGHYKLANKIDSDNAETTDACLNEEYKKALKENLQHSKCQSTGDRILA
FKERPAAAQGYQNSTKVLYSSTKKSVANKKKSRFIPSNADRILDAPQLLDDFYLNLIDWS
SNNVLAVALNENLYLFNTETGDIQLLFTLEGTEDYISSLRWVDDGRHIAVGTSNAEVQLW
DVKESKRLRNMMSHAARVGSLCWNDFILSSGSRDGFIHHHDVRVARHHICTLQGHSQEVC
GLEWSADMKYLASGGNDNLVNVYDSREVQPLYTFTEHQSAVKALAWCPWQPNILATGGGS
ADRYIRFWNAYSGALSNSIDTNSQVCAIKWSKTYKELVSSHGYSQNQLTIWSYPSMRRVQ
DLMGHSARVLSLTLSPDGSTVCSGAADETLRMWKCFAPNCEKKSKKVVSDSSNHMDENRK
DSSRIAPLITTFHPIFVSYKESSVSSTYKITIEEYKVLFTHD
Nucleotide sequence
Length: 1,962
>Harore.CG.MTP2014.S75.g07902.01.t
ATGAAAGGGTTTAATAAACCTTTATTGGTGTTTGAGCTTATAACCATCATCTCCTTAACA
ATGTCTTCCCATTTTGATTTTGAAAATGAACTGAATAATCTTGTTCGTTTGGATGTTCCA
ATAAACTCTGGACCAACGCCAAGGTGGCGACGAAAAGCATTGGAAGTTCCAAGTTGCAAT
TCCAGCAGCTTGTCACTGAGCATGAATACAAGCCCGCTGAAAATTTCTAATCGTTCTCTG
AGCCAATGCATGAATAAAACTCCATCATCTGGTAGAACTCCATCTTCAGCTAGGAATAAA
ACTCCAGGAAAAGAAAAAACCCCTAACAAAAGTGTTAATAAAACTCCAAGCCGCGGTGAC
AGATACATTCCGAACAGACAAAGCACAAACTTTGAATTGGGCCATTACAAACTCGCAAAC
AAGATAGACTCTGATAATGCTGAAACCACTGATGCGTGCTTGAATGAAGAATACAAAAAA
GCCCTAAAAGAGAATCTTCAACATTCAAAATGTCAGAGTACTGGTGACCGAATTTTAGCT
TTCAAAGAAAGACCTGCAGCTGCCCAAGGATATCAAAATAGCACCAAGGTCTTATATAGC
TCCACAAAAAAATCAGTAGCAAATAAAAAGAAATCAAGATTTATACCATCGAATGCGGAT
CGGATTCTTGATGCTCCACAATTGCTGGATGATTTTTATTTGAACCTGATTGACTGGAGT
TCAAACAATGTTCTTGCTGTTGCACTTAATGAAAATTTATATCTCTTCAACACGGAAACT
GGTGATATTCAGTTGCTATTTACGTTAGAAGGTACAGAGGACTATATTTCCTCGCTACGT
TGGGTGGATGATGGTCGACATATAGCAGTTGGAACTAGTAATGCTGAAGTTCAGTTGTGG
GATGTCAAAGAGTCCAAGAGACTGCGAAACATGATGAGTCATGCAGCTCGAGTTGGATCT
CTGTGCTGGAATGACTTTATTTTATCCAGTGGTTCAAGGGATGGATTCATACATCACCAT
GATGTAAGGGTAGCAAGACATCATATTTGCACCTTACAAGGCCATTCTCAGGAAGTGTGT
GGACTTGAGTGGTCTGCAGATATGAAATATCTTGCCAGTGGAGGAAATGACAACTTGGTA
AATGTCTATGATTCCAGGGAAGTCCAGCCTTTATACACATTCACGGAACATCAATCTGCA
GTAAAAGCCCTGGCTTGGTGTCCATGGCAGCCTAATATTCTTGCCACTGGTGGAGGTAGC
GCAGACAGATATATACGCTTCTGGAATGCGTATAGTGGTGCTCTCTCTAATTCCATAGAT
ACAAATTCACAGGTTTGTGCTATCAAGTGGTCGAAAACATATAAGGAACTTGTATCGTCT
CATGGTTATTCTCAAAACCAATTAACAATATGGTCATATCCGTCAATGCGCCGTGTTCAA
GATTTAATGGGACATTCAGCAAGGGTACTTTCCTTAACTCTAAGTCCTGATGGCTCCACT
GTTTGTTCGGGAGCTGCTGATGAAACTTTGAGAATGTGGAAATGTTTTGCACCTAATTGT
GAAAAAAAATCAAAGAAAGTGGTTTCAGATTCCAGCAATCACATGGATGAGAATCGAAAG
GACAGTAGCCGAATCGCACCCTTGATCACAACTTTTCATCCTATATTTGTTTCATATAAG
GAATCGAGTGTTTCTTCCACATACAAAATAACAATTGAAGAATACAAGGTTTTATTTACA
CATGACTGATCACATGTAATATAGAATTACAGAGAGTGTTGTGAAGTGTTTTTATTATGT
AGTTATGAACTTCATACTACACTACACTATTGGAAATTCAAAATAATTTTCATTCACTTG
TTATTATTGTCTGGTTAAAATGATTTGCAAGTGGCTTATTATTATAGTAAAGGTATCCAT
GATATGTATTTATATTATAGATAATAAAATGAACTTAAAATA
| PANTHER |
Cdc20/Fizzy (IPR033010) - T[26-527] 1.5E-185 |
| PANTHER |
CDC20 (IPR033187) - T[26-527] 1.5E-185 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[175-517] 3.1E-121 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[219-515] 4.03E-60 |
| Pfam |
Apc4_WD40_dom (IPR024977) - T[246-324] 1.1E-6 - T[343-407] 2.5E-5 |
| SMART |
WD40_repeat (IPR001680) - T[262-301] 1.7E-5 - T[304-341] 0.37 - T[345-384] 4.0E-7 - T[387-429] 1.9E-5 - T[432-472] 170.0 - T[475-514] 7.7E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[269-523] 33.906 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[269-310] 12.38 - T[352-393] 12.781 - T[482-514] 13.917 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[416-430] . |
| Pfam |
WD40_repeat (IPR001680) - T[482-514] 8.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZR1_HUMAN | 42.009 % | 320 | 2.27E-103 |
| CDC20_HUMAN | 52.295 % | 529 | 0 |
| CD20B_HUMAN | 34.661 % | 274 | 2.67E-85 |