Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S76.g11612.01.t

Possible name(s)

ATP5F1D

Gene model

Harore.CG.MTP2014.S76.g11612

Location

S76 [99,063 / 100,166]

Sequences

Amino acid sequence

Length: 180

>Harore.CG.MTP2014.S76.g11612.01.p
NITLLITFTYNFVMASLSVRLVGRAVRCSRLALMQSRRGYADAPAAVTQMQFTFGSPTES
FYQDSTAVKQVDVPTGSGVIGILANHVPTLGVLKPGVLTVFEMEGKVNKYFVSSGTFSVN
EDSSVQIVAEESVAIDQLDRDRAKENLTKAQSSLASATTDIERAEAQVLIECNEAIVNAA

Nucleotide sequence

Length: 705

>Harore.CG.MTP2014.S76.g11612.01.t
AGAACATCACCCTTTTAATAACGTTCACCTATAATTTCGTAATGGCATCATTATCTGTGC
GTTTGGTCGGTAGAGCTGTAAGATGTTCACGTCTGGCATTGATGCAGTCTCGTAGGGGAT
ACGCAGATGCCCCCGCAGCTGTTACTCAAATGCAATTCACATTCGGATCTCCAACCGAGA
GCTTTTACCAAGACAGCACAGCAGTTAAACAAGTTGATGTACCCACGGGTTCAGGGGTGA
TCGGTATTCTTGCAAACCACGTCCCCACACTCGGGGTGCTGAAACCCGGCGTGTTGACTG
TGTTCGAGATGGAGGGGAAAGTCAATAAATACTTTGTAAGCAGTGGGACTTTTTCTGTGA
ATGAAGATTCATCCGTTCAGATCGTTGCCGAAGAATCCGTGGCAATTGACCAATTAGACA
GAGATAGAGCTAAAGAAAACCTAACAAAGGCCCAATCAAGTTTAGCGTCAGCGACAACCG
ATATCGAGCGCGCTGAAGCCCAAGTGCTCATCGAATGCAACGAAGCGATCGTTAATGCGG
CATAGCACTCTAGTTTGATTTGTATATAATGTATGTGAACAGTTAAAAATGGCTATTCGT
GTGCATATATGTTCTGACCGTTTCCTTGCATCTTTATGAAATAAAAATTGATTGTAAAAT
GTTACTTTTCTGCAAAGGAAATTCAGGTTGTTGGTTAAACGGAAG

InterProScan

PANTHER	ATP_synth_F1_dsu/esu (IPR001469) - T[35-179] 2.2E-42
Gene3D	ATPsynth_dsu/esu_N (IPR036771) - T[38-138] 5.0E-34
Hamap	ATP_synth_F1_dsu/esu (IPR001469) - T[48-179] 14.95
CDD	ATP_synth_F1_dsu/esu (IPR001469) - T[50-175] 2.26094E-34
SUPERFAMILY	ATPsynth_dsu/esu_N (IPR036771) - T[50-132] 1.11E-17
Pfam	ATP_synth_F1_dsu/esu_N (IPR020546) - T[50-131] 3.5E-15
ProDom	ATP_synth_F1_dsu/esu_N (IPR020546) - T[56-138] 6.0E-22
TIGRFAM	ATP_synth_F1_dsu/esu (IPR001469) - T[65-179] 1.2E-21
SUPERFAMILY	ATP_F1_dsu/esu_C_sf (IPR036794) - T[136-179] 8.24E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATPD_HUMAN	54.962 %	143	5.16E-44