- Transcript 'Moocci.CG.ELv1_2.S53...' >
- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S777.g06411.01.t
Possible name(s)
DYSF; FER1L6; OTOF
Gene model
Location
S777 [0 / 10,400]
Amino acid sequence
Length: 786
>Harore.CG.MTP2014.S777.g06411.01.p
VDISVVGKGDSIKIPKVADDEEDNIEEKNMLLPDGVTADRQRARFFFRIYHAEGLPKMNT
TVTEKLKSMLQGEHRDLVDPYVEISFCGQKGRTSVRKHSYEPSWNEEVIFTELFPPLCKR
IKIQLRDKDNLHNTIIGTTFIDLDKISNSADKGFLPTFGPTYVNLYGSPRFYTVVNEHGD
LNAGMGEGVAFRGRILLGIFVQPVDSSAADGNGSSAVEVETIPQLSELGAGRVEDFFLFG
SILEANMINRMLQDKPISFEMTIGNFGNLIDGANFSQKNRGGAGNGGGDDSDDDSDEETR
SLLRGIQTQEVREPEIRSMTTPATSVTDDSYYFHLPFHGKKPCLFITSQWHDQKRRFYNS
NIMHKIADKLDEGLQDVHEMMKTDQEAPHRRLRGVVEELANGCQSYTRLVKGTGTGGGTM
LGRTKLDRERNKLCLREMENIATEFRKIKKQIKPSTMREKLNRAKLYLNXIRFLADDLQD
SVPDVFIWLISGVKRVAYARIPARKIMYSLRDEESGVHCGKIQTIFLRYPGRRSLGPGGW
SIQAKLDIYMWLGLAKHKRDYLKGLPEGFEQIPSSVPKSPPSMITYKDKQTFQLRCHLYM
ARGLIAADDSGLSDPYAKIIFGTNTGTTQFMEETLNPTWDQTLVLDEVTLYGRAEELRDD
PPVIIVEIFDRDVVGNNEYIGRTMAKPFVKMSWEKYEKKFPPQLDWYQIYRGSMKAGELL
ASFELLQIKTPKSLENVPAVSETVVTNQGSKFTVPKGIRPLLAKHRIEMQTSNKEALVVS
DVTVVT
Nucleotide sequence
Length: 2,361
>Harore.CG.MTP2014.S777.g06411.01.t
GTCGACATCTCTGTAGTTGGAAAAGGAGACAGCATCAAAATCCCAAAAGTTGCTGATGAT
GAAGAAGATAATATCGAAGAAAAGAACATGCTTCTACCAGACGGTGTCACTGCTGATCGG
CAAAGAGCCCGGTTCTTCTTCCGAATCTATCACGCAGAGGGTTTACCGAAGATGAACACG
ACGGTGACGGAGAAGCTAAAATCCATGTTGCAGGGTGAACACAGGGATCTTGTTGATCCA
TATGTTGAAATATCATTCTGTGGTCAGAAGGGTCGGACGTCAGTTCGTAAGCATTCTTAC
GAACCATCTTGGAACGAGGAGGTCATCTTCACTGAGCTCTTTCCTCCTCTCTGCAAGAGG
ATAAAGATCCAATTAAGGGACAAGGACAATCTCCACAATACGATCATTGGAACGACATTC
ATTGACCTTGATAAGATTTCAAATTCTGCAGATAAAGGATTTCTACCAACTTTCGGCCCC
ACGTACGTCAACTTGTACGGCAGTCCCCGATTTTACACGGTTGTGAATGAGCATGGTGAT
CTCAATGCCGGGATGGGTGAAGGTGTCGCTTTTCGGGGCAGAATCCTACTCGGGATCTTC
GTTCAGCCGGTTGATTCGAGCGCTGCTGATGGAAACGGTTCGTCTGCTGTAGAAGTTGAG
ACGATACCACAGCTTTCAGAGCTTGGCGCAGGTCGTGTCGAAGATTTCTTCCTTTTTGGG
TCGATCCTCGAAGCGAATATGATAAACAGAATGTTGCAAGACAAACCGATCTCATTCGAA
ATGACAATTGGAAATTTCGGTAACTTGATTGACGGAGCAAATTTCAGCCAAAAAAATCGA
GGGGGAGCCGGGAACGGAGGAGGAGATGATTCTGATGATGATTCTGATGAAGAAACGAGA
TCTTTGCTACGAGGAATCCAAACACAAGAAGTGAGAGAACCTGAAATAAGATCAATGACA
ACACCCGCAACTTCGGTAACAGATGACAGCTATTATTTTCATCTTCCATTCCACGGCAAA
AAACCATGTTTGTTCATCACAAGTCAGTGGCACGATCAGAAGAGAAGATTTTACAATTCA
AACATCATGCATAAGATCGCTGATAAATTGGATGAAGGATTGCAAGATGTTCACGAAATG
ATGAAAACAGATCAGGAAGCTCCTCACAGGAGACTTCGAGGAGTTGTTGAGGAGCTTGCC
AACGGTTGTCAGTCGTACACGAGACTCGTGAAAGGAACCGGGACAGGAGGAGGAACAATG
CTGGGAAGAACAAAACTGGATCGAGAGAGGAATAAACTTTGTCTTAGAGAAATGGAAAAC
ATCGCAACAGAATTTCGCAAGATCAAGAAACAAATCAAACCGTCGACAATGAGAGAAAAA
TTAAACAGAGCTAAATTGTATTTGAACAGNATTCGATTCCTTGCTGATGATTTACAAGAC
AGTGTCCCTGATGTCTTCATCTGGCTGATTTCCGGAGTGAAAAGAGTCGCCTACGCTCGC
ATCCCGGCCAGGAAGATTATGTATTCGCTTCGTGATGAGGAGTCCGGAGTGCATTGCGGG
AAAATACAAACTATTTTTCTGAGATATCCTGGTCGACGTAGTCTCGGTCCTGGCGGTTGG
AGCATCCAAGCTAAACTCGACATATACATGTGGTTGGGTCTCGCCAAACATAAGAGAGAT
TATTTGAAAGGATTACCAGAAGGATTCGAACAGATTCCGTCATCAGTGCCAAAATCTCCT
CCATCTATGATCACATATAAAGACAAACAAACCTTCCAACTTCGCTGTCACTTATACATG
GCACGGGGTTTAATTGCCGCTGATGACTCTGGTCTATCCGATCCGTATGCAAAGATTATA
TTCGGTACAAACACAGGAACCACTCAGTTCATGGAAGAAACTTTGAATCCAACCTGGGAT
CAAACTCTTGTTCTTGATGAAGTTACTTTGTACGGACGAGCTGAAGAACTAAGAGATGAT
CCACCTGTGATTATTGTTGAAATATTTGACAGAGATGTTGTTGGTAACAATGAGTACATT
GGAAGAACGATGGCAAAACCTTTCGTCAAAATGAGCTGGGAAAAATATGAGAAGAAATTT
CCTCCTCAGCTCGATTGGTATCAGATCTACAGAGGAAGTATGAAAGCAGGAGAACTACTC
GCTTCGTTCGAATTACTTCAGATCAAGACACCGAAATCGCTGGAAAACGTTCCCGCCGTC
TCCGAAACAGTTGTCACGAATCAAGGGTCAAAGTTCACGGTACCTAAAGGGATTCGACCT
CTGCTTGCCAAGCATAGGATCGAGATGCAAACAAGTAACAAAGAAGCATTAGTTGTTAGT
GATGTCACTGTCGTGACGTAA
| Pfam |
FerIin_dom (IPR012968) - T[1-36] 1.2E-6 |
| PANTHER |
Otoferlin (IPR029996) - T[2-769] 8.1E-292 |
| PANTHER |
Ferlin (IPR037721) - T[2-769] 8.1E-292 |
| Gene3D |
C2_domain_sf (IPR035892) - T[36-161] 3.6E-18 - T[586-746] 1.3E-19 |
| CDD |
C2C_Ferlin (IPR037722) - T[44-193] 1.12095E-81 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[44-140] 11.922 - T[579-684] 14.008 |
| SMART |
C2_dom (IPR000008) - T[44-155] 8.5E-13 - T[593-693] 4.1E-7 |
| Pfam |
C2_dom (IPR000008) - T[46-150] 1.2E-16 - T[593-683] 5.8E-12 |
| SMART |
Ferlin_B-domain (IPR012561) - T[478-554] 4.2E-44 |
| Pfam |
Ferlin_B-domain (IPR012561) - T[479-553] 1.6E-29 |
| CDD |
C2D_Ferlin (IPR037723) - T[592-729] 4.3862E-65 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTOF_HUMAN | 50.129 % | 815 | 0 |
| FR1L6_HUMAN | 40.998 % | 641 | 0 |
| FR1L4_HUMAN | 34.227 % | 449 | 1.29E-138 |