- Transcript 'KH2012:KH.L95.1.v1.A...' >
- Clone 'cien222084' >
- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S78.g14749.01.t
Possible name(s)
TBR1; TBX21; TBXT
Gene model
Location
S78 [57,439 / 71,268]
Amino acid sequence
Length: 951
>Harore.CG.MTP2014.S78.g14749.01.p
MNRNSVLVVIQCNSEERSRSRQADMVSEQSERKMVITSIKLVKSLSRIITRKKVTEKPMA
DVAFGNYHYQSYGNQGVPNMQQYSQSPPMQVVGSVPSRLGHQGMQNQRYNPYQRPSPPAQ
QQQHMRLHQQQQQQQQQQQQQQHMRQPQMVNRHSYNPNQQWNHGGKVMQQDYNANSNPMY
FNQASRQSNNWQQQNNGFYHQENVMRQQQVSPPLIQSANFQNNGHDLIQDQAGMRRRMSS
SSQCSDYSSMAPSNDGRQWMVSPNTNQVQQGAQFHPQGSHFASQASPNTGTIPTWNGSLP
HSTPSPLSSISSDNCSPPPPYVPFNQQTQFRHPSAIQPSVPKLQPQVPQVNVPLVSTDIP
PGTTTGTSGNDWAVNCLGTEVKLRNSDLWKHFDNVVMEMVISKHGRRMFPVLEYDIKGLH
PFKLYSVFVDFVLANKYVWKFSEQKWNPSGLAPDEDAYDQSHRVCLHPDSPAPGEVWNKR
GASFSKMKLSNHLHTESDKLSLKSLHKYQPRLHVVEVDPRDPTIQTNLRTFIIPKTRFMT
VTLYHNTDVAQLKINLNPFARCFRDKEISPMSKPIENSGDRQPERSAVSYDVTSPNNSEN
LESISVGSPTSHEQKTIYKVQNPISESDLTRAKNFMQAQMNTMTQLVRTQDALNQGSEPV
KIEQESVEERTEEIKRAPLHAVDFDRELEGLLSSIDSRTAKKAISASAGKGQERKTVHHY
PPASEGRCNDMPKTKYMKKEKSPSNENSLDKYELLDVDRGFPPNAVAPLSNTLPFDPSEI
KNDKFSKDNDKILPTFFKCSYYQEQAAAQAGFVSSKQNNNESNLPVVYVPKPVTSTSPTV
TAEQHEISEIREEKHQHHGLDTSPTSSAASSESIASFNPYPLPTLSPKSLRQFLDEDLNE
MMSGNKRKCSFDDDIDDDVFGNDTSLLNVCGMFQGQQQQPIQQYLSTQGFL
Nucleotide sequence
Length: 3,900
>Harore.CG.MTP2014.S78.g14749.01.t
ATGAACCGAAATAGTGTGCTTGTGGTGATACAATGCAACAGTGAAGAGCGTTCTAGATCT
CGGCAAGCAGATATGGTTTCCGAGCAAAGCGAAAGAAAAATGGTTATCACGAGTATCAAG
CTTGTGAAATCATTATCAAGAATTATTACAAGGAAGAAGGTTACAGAGAAACCTATGGCT
GACGTTGCATTTGGAAATTATCATTATCAAAGCTATGGAAATCAAGGTGTTCCAAACATG
CAACAATACAGTCAAAGTCCTCCTATGCAGGTAGTTGGTTCTGTACCATCTCGATTAGGG
CATCAAGGAATGCAGAATCAGAGATATAACCCGTACCAAAGACCATCACCCCCAGCACAG
CAACAGCAGCATATGAGACTCCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAA
CAACAGCACATGAGACAACCTCAGATGGTCAACAGGCATTCCTACAATCCAAACCAACAA
TGGAACCATGGAGGGAAAGTGATGCAGCAAGATTATAATGCAAACTCCAATCCAATGTAT
TTTAACCAAGCTTCAAGACAAAGCAACAACTGGCAACAACAAAACAATGGATTTTATCAT
CAGGAAAACGTCATGAGACAACAGCAGGTGTCACCTCCCTTAATTCAATCCGCCAATTTT
CAAAACAACGGTCATGATCTGATCCAAGATCAAGCTGGAATGAGAAGGCGGATGTCGTCT
TCGTCACAATGCTCAGATTATAGCTCCATGGCACCATCTAACGATGGTCGACAGTGGATG
GTTTCACCCAATACAAATCAAGTTCAACAAGGGGCTCAATTTCATCCCCAAGGCTCCCAT
TTCGCCTCACAAGCTTCGCCCAATACCGGAACCATACCAACGTGGAACGGGTCACTGCCC
CATAGCACCCCTTCCCCACTATCAAGTATTTCCAGTGACAATTGTTCACCCCCTCCGCCA
TACGTTCCATTCAATCAACAAACTCAATTCAGGCACCCATCTGCAATACAACCGTCAGTG
CCGAAATTACAACCGCAAGTTCCTCAGGTCAATGTGCCTCTTGTTTCAACGGATATCCCA
CCTGGTACGACCACGGGAACGAGCGGAAATGACTGGGCAGTAAACTGTCTTGGAACAGAA
GTAAAATTAAGAAATTCAGATCTGTGGAAACATTTCGACAATGTCGTCATGGAAATGGTC
ATCAGCAAACACGGAAGGCGGATGTTTCCAGTATTGGAATATGACATCAAAGGTCTTCAT
CCATTTAAGCTTTACAGCGTTTTTGTGGATTTTGTTTTAGCAAACAAATATGTATGGAAA
TTTAGCGAACAGAAATGGAATCCATCAGGTCTTGCTCCTGATGAAGATGCTTACGACCAA
AGTCATCGCGTATGCCTGCATCCTGACTCGCCAGCGCCAGGAGAAGTTTGGAATAAACGC
GGTGCAAGCTTTTCTAAGATGAAATTAAGCAACCATCTTCACACTGAAAGCGACAAGCTT
TCGTTGAAATCTTTACATAAATATCAACCGCGCCTCCACGTGGTGGAGGTTGATCCTCGT
GATCCGACAATTCAGACGAATTTGAGGACATTCATCATTCCAAAGACTCGCTTCATGACC
GTTACCCTTTATCATAACACTGACGTAGCTCAATTGAAAATCAACCTTAACCCATTCGCA
CGATGTTTCAGAGACAAAGAAATAAGCCCTATGTCGAAGCCAATTGAAAATAGCGGAGAT
AGACAGCCAGAACGGTCTGCGGTATCTTATGACGTAACGTCTCCCAACAACAGCGAGAAT
TTGGAATCGATATCAGTAGGTTCGCCGACTTCACATGAGCAGAAGACTATATACAAAGTG
CAGAACCCAATAAGTGAATCAGATCTCACAAGAGCAAAGAACTTTATGCAAGCACAAATG
AATACCATGACCCAGCTGGTCAGGACCCAAGATGCCTTGAACCAAGGCAGCGAGCCTGTA
AAGATCGAGCAAGAGTCGGTTGAAGAACGAACAGAAGAAATCAAACGAGCTCCATTACAT
GCAGTCGACTTCGACCGGGAGTTAGAAGGTTTACTGAGTAGCATAGACAGTCGCACAGCG
AAGAAAGCTATCAGCGCCTCTGCCGGAAAAGGACAAGAGAGAAAAACAGTTCACCATTAT
CCTCCCGCGTCGGAAGGCAGATGTAACGACATGCCAAAAACGAAATACATGAAAAAAGAA
AAGTCACCTAGCAACGAAAATTCTCTCGATAAATACGAACTACTTGATGTCGATCGAGGT
TTCCCGCCAAACGCAGTCGCACCATTAAGTAACACTCTACCGTTCGATCCAAGCGAAATT
AAAAATGATAAATTTTCCAAAGACAACGACAAAATACTGCCAACATTTTTTAAGTGCAGT
TATTACCAAGAACAAGCAGCCGCCCAAGCTGGGTTCGTGTCCAGTAAGCAAAATAACAAT
GAAAGTAACCTTCCTGTTGTGTACGTCCCCAAACCAGTTACATCAACGTCACCCACTGTC
ACCGCAGAGCAACACGAGATATCAGAAATACGGGAGGAAAAACACCAACACCACGGGTTG
GATACGTCACCAACTTCGTCAGCTGCGTCATCCGAATCTATTGCGTCATTCAACCCTTAC
CCTCTCCCAACACTTTCGCCAAAATCATTGAGACAATTTCTAGACGAAGATCTTAACGAA
ATGATGTCGGGAAACAAAAGAAAATGTTCGTTCGATGACGACATAGACGATGACGTATTC
GGTAACGATACGTCACTACTCAACGTGTGCGGAATGTTTCAAGGACAACAGCAACAACCA
ATACAACAATATTTATCCACTCAAGGATTTTTATAAACACGTTTTGGTAATGGTTCATTT
GTTGATCGTAATTCTATCGTGAAGTGTCGGAAGCTAGAGCGAAATTGCAGTACATCAAAT
TATAATGTGATTTTTGTAATTAACATATCATTTCGCTCGTCAAATTATAATTCTGATAAT
TCTGCTCAATCATTATAATTCTGTCGGAAAGTGTCTATCTTAGTCAATAGTACGAGCAAA
ATCGTCATCGCTGAAATTGTAATTGAAACATAGAATTACGATATATATAGGTATTTATCA
TTGATGCTTGTCAGAAAAGGCAGTCGGTGTTTTCGTTACACTGATGAAAACTTAAATTTT
ATTACTTCTTATCAGAGCGACAAGAATCCATCACTACGTCACTTGGGCATTTATCTTTAA
AAATGTATTTACTAAGTCTTACCTCCGAATACCCACATTAAAAGACTAATAGTGTGATAT
CCGTTTATAACAATCGGTCTTAAACTAACTCCTGAGTAAACCTTACTTATGGTTCTTGAG
GCATCTTGTATTATTTAATGCTGTAAATTCTCTCGGACGAGTTACATTAATGATATGAAA
TTATCTGTGATATGAATTCCACCACATATATACCAGAAATTCTTTCCAGTTATAGCAAAC
CTTGCTCATAAACTATATTTAACCACAGAGCCGTTTCTTTTACCACAAATACTATTACTA
GGCCAAAAATTTATACTTCATTGTGTGAAACAATCAAGACGACGCGCTCACGATAGATTT
ATGCTCAACGAATGTACCATTACCCAATTTAACGTGATTTTCCGAATCATTCCGATTATT
TCCAATAAGTTCAATCCGATGTTCTCACGCGTGTTACTGTTTTTATTCTCTTTCTTCTTC
TATTTCCGACAGTTTCATATCATTTTAACGTTAATTGGTTTATTATTCATCATAGCTTAT
TGTGAGCTATTATTTTACTCCTATTCGGTTACATTCCAATTGATTTTACTGTTTACGTTC
TATTACGTTCGCTTTTGCTGCTGGGTAGCAAGGAAATAAAATTTAAATGGTAAATGTGAA
| PANTHER |
TF_T-box (IPR001699) - T[84-266] 5.1E-65 - T[349-870] 5.1E-65 |
| ProSiteProfiles |
PLipase_C_Pinositol-sp_Y (IPR001711) - T[150-206] 10.15 |
| Gene3D |
T-box_sf (IPR036960) - T[372-566] 5.7E-61 |
| CDD |
TF_T-box (IPR001699) - T[378-569] 1.29467E-93 |
| SMART |
TF_T-box (IPR001699) - T[378-570] 2.4E-64 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[379-565] 1.23E-59 |
| Pfam |
TF_T-box (IPR001699) - T[381-565] 2.7E-57 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[383-565] 57.514 |
| PRINTS |
TF_T-box (IPR001699) - T[396-420] 3.9E-28 - T[465-478] 3.9E-28 - T[482-491] 3.9E-28 - T[501-515] 3.9E-28 - T[536-549] 3.9E-28 - T[557-565] 3.9E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAC_HUMAN | 41.872 % | 157 | 2.95E-41 |
| TBX1_HUMAN | 40.933 % | 152 | 7.12E-40 |
| TBR1_HUMAN | 46.907 % | 172 | 7.53E-45 |