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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S79.g03603.01.t

Possible name(s)

EXOSC1

Gene model

Harore.CG.MTP2014.S79.g03603

Location

S79 [261,074 / 262,412]

Sequences

Amino acid sequence

Length: 233

>Harore.CG.MTP2014.S79.g03603.01.p
MNWILFSLMCHLFNQDNAVILLNYISTFIFHTIFIVVVNTEHQICIPGERLASVESCQAG
FGTYVRHGYIFASLAGILQREIKSGLPTLSIKSKHPKERLPKIDTIVTCKITAISTRFAK
CQIIAVDNVTISESFRGMIRKEDVRAKEIDKVEISKSFRPGDIVLAKVLSLGDASFYLLT
TAENELGVVIARSEAGELMLPINWQEMQCPVSFVKEYRKVARPQKEYLEIPER

Nucleotide sequence

Length: 702

>Harore.CG.MTP2014.S79.g03603.01.t
ATGAATTGGATTTTATTTTCATTAATGTGTCATTTGTTCAATCAAGATAATGCCGTTATT
TTGCTGAATTATATCTCTACATTCATTTTTCATACTATTTTCATCGTTGTTGTTAATACG
GAACATCAGATATGCATTCCAGGTGAACGCTTAGCGAGCGTGGAATCATGCCAAGCCGGA
TTTGGAACTTATGTCAGACACGGATACATATTTGCATCCCTCGCTGGTATCCTGCAGCGT
GAAATCAAATCAGGACTGCCTACTCTATCCATAAAGTCTAAGCACCCCAAAGAAAGATTA
CCAAAAATCGATACCATTGTGACTTGCAAGATAACTGCAATAAGTACAAGATTTGCAAAG
TGTCAAATAATTGCTGTTGACAACGTAACAATTTCCGAGTCTTTCCGCGGAATGATTCGA
AAAGAAGACGTAAGAGCGAAGGAGATCGACAAAGTGGAAATTTCAAAGAGTTTCCGACCG
GGAGATATAGTTTTGGCCAAAGTTCTATCTCTCGGAGACGCATCTTTTTATCTGCTGACA
ACAGCGGAAAATGAACTCGGCGTTGTCATTGCAAGAAGTGAGGCAGGAGAACTGATGTTG
CCGATAAACTGGCAAGAAATGCAGTGTCCCGTGTCTTTCGTGAAGGAGTATCGTAAAGTC
GCAAGGCCACAGAAGGAGTATCTCGAAATACCAGAACGATAG

InterProScan

Pfam
Exosome_cplx_N_dom (IPR025721) - T[44-80] 8.0E-12
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[100-220] 9.43E-35
Pfam
EXOSC1 (IPR019495) - T[131-171] 1.6E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS1_HUMAN 60.963 % 227 9.34E-76