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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S7...' > 
  3. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S79.g03603.02.t

Possible name(s)

EXOSC1

Gene model

Harore.CG.MTP2014.S79.g03603

Location

S79 [261,054 / 262,268]

Sequences

Amino acid sequence

Length: 204

>Harore.CG.MTP2014.S79.g03603.02.p
TDCIIMSEFIAEHQICIPGERLASVESCQAGFGTYVRHGYIFASLAGILQREIKSGLPTL
SIKSKHPKERLPKIDTIVTCKITAISTRFAKCQIIAVDNVTISESFRGMIRKEDVRAKEI
DKVEISKSFRPGDIVLAKVLSLGDASFYLLTTAENELGVVIARSEAGELMLPINWQEMQC
PVSFVKEYRKVARPQKEYLEIPER

Nucleotide sequence

Length: 636

>Harore.CG.MTP2014.S79.g03603.02.t
AACGGATTGCATTATCATGTCTGAATTCATAGCGGAACATCAGATATGCATTCCAGGTGA
ACGCTTAGCGAGCGTGGAATCATGCCAAGCCGGATTTGGAACTTATGTCAGACACGGATA
CATATTTGCATCCCTCGCTGGTATCCTGCAGCGTGAAATCAAATCAGGACTGCCTACTCT
ATCCATAAAGTCTAAGCACCCCAAAGAAAGATTACCAAAAATCGATACCATTGTGACTTG
CAAGATAACTGCAATAAGTACAAGATTTGCAAAGTGTCAAATAATTGCTGTTGACAACGT
AACAATTTCCGAGTCTTTCCGCGGAATGATTCGAAAAGAAGACGTAAGAGCGAAGGAGAT
CGACAAAGTGGAAATTTCAAAGAGTTTCCGACCGGGAGATATAGTTTTGGCCAAAGTTCT
ATCTCTCGGAGACGCATCTTTTTATCTGCTGACAACAGCGGAAAATGAACTCGGCGTTGT
CATTGCAAGAAGTGAGGCAGGAGAACTGATGTTGCCGATAAACTGGCAAGAAATGCAGTG
TCCCGTGTCTTTCGTGAAGGAGTATCGTAAAGTCGCAAGGCCACAGAAGGAGTATCTCGA
AATACCAGAACGATAGACGGAGGTTATCGCAGACAT

InterProScan

Pfam
Exosome_cplx_N_dom (IPR025721) - T[15-51] 6.5E-12
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[71-191] 6.49E-35
Pfam
EXOSC1 (IPR019495) - T[102-142] 1.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS1_HUMAN 60.963 % 227 2.86E-76