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  1. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S7.g08622.01.t

Possible name(s)

FOXN1; FOXN2; FOXN3

Gene model

Harore.CG.MTP2014.S7.g08622

Location

S7 [178,244 / 186,330]

Sequences

Amino acid sequence

Length: 918

>Harore.CG.MTP2014.S7.g08622.01.p
MMMLEEKGQKVVISDSCTSDIPATESRVAKEGRREEKLPQSSTVNLVTPNTFVVRLKPAG
NDSESSTDKESRAKGEKSNLLRFFYGKAGSNVSIVKALGLGKIVVKKSMLDKPKCNIDAS
NVYKKSQIISHEKNLSMKLATTASPKTGSNGYKSNFIAKPKHLSAARNEGGRQIYTREQS
QHHSYPQQKRKSWNGDIKVKVEDSSEFSDNLSSFMNFSLNTLVNKPVKSPLREVGRNFSY
RNADVYSFGKRSRIAKKEPMKETNSNPKEFSSIEHLQALDDDLTSLSWLCSDKSLIKTIR
QCNPDDAGISLSGDESDGQGDGKNSINPDDMAIFTAKSKVEGTGQVGYSDEHGAAYNPKG
KPPYSFSCLIFMAIEDSDKKMLPVKDIYTWVCKHFPYFQTAPAGWKNSIRHNLSLNKCFK
KAEGGYVELVPSHEQAKGSLWCIDPAYRPNLIQALKRSPYYPYLYPSGIGQPLSLNNLAS
LLPSVRSGRIPMWSPYMSASTDSAWADPDVASAALNLLGLKKNDISENQNQNVKSTLMEL
TEEMYRRVQTMNQSSQESTIGMIPLIITDPSEDHTYTSTPQQNCKNERCETPESVKSAPD
AAYEFETCGTDMDSDIADTVSIDGSGAFSDQNKQEIDLGDSGFASLRSHPMPKRNRRSLQ
EKNAGKRKKPADHSPPAKQAKQSCGWNGKSKSQSKRLPKKSKKTLKVDFQNHRKSKSIQS
KPMKLVKKELLTSDDDSGKDSPKPIKKTRSVFPRKQNFYSKTYKSRTKAAENPGSPYGTR
SNTLLERKKKADECRNRRKSRRRRQSITCIDVDDEVKLAAGSLLHLAGFSCEGNGENACH
SLDVIYEQESIKPYAPILYLRVAILMSRLLQPFRSTMCKLISVYIFLCYCNFLLNHNIRK
HFEKSFMLYSGKMVVEFS

Nucleotide sequence

Length: 4,966

>Harore.CG.MTP2014.S7.g08622.01.t
AGGTGATATACTATGTAGCACTAAAACTACTTTGTCAAACTGTAATCAATCATAATTTTT
TGAGCAATAGTGGATGATGATGCTAGAGGAAAAAGGGCAGAAAGTCGTGATTTCTGACTC
TTGCACATCTGATATACCAGCCACCGAGTCTCGTGTCGCAAAAGAAGGAAGACGTGAAGA
AAAACTTCCACAATCATCTACCGTAAATTTAGTCACACCTAATACATTTGTTGTGAGATT
GAAACCTGCTGGAAACGATAGCGAGTCCTCTACAGATAAGGAAAGTCGTGCCAAGGGAGA
AAAAAGCAATCTGTTGAGATTTTTCTATGGTAAAGCTGGTTCGAATGTTTCCATTGTCAA
GGCTCTCGGTCTGGGCAAAATCGTTGTGAAAAAATCTATGTTGGACAAGCCCAAATGTAA
TATTGATGCTTCCAATGTCTACAAAAAATCTCAGATAATTTCCCATGAAAAAAATCTTTC
TATGAAACTCGCTACTACTGCCTCACCCAAAACCGGTTCCAATGGCTATAAAAGCAATTT
CATTGCTAAACCAAAACATCTGTCAGCTGCTAGAAACGAAGGCGGAAGACAAATCTACAC
GCGCGAACAGTCGCAACATCACAGCTACCCTCAGCAGAAAAGAAAATCTTGGAACGGAGA
TATCAAAGTAAAGGTGGAAGACAGCTCCGAGTTCTCCGACAATTTGTCGAGTTTCATGAA
TTTTAGTTTGAATACCTTGGTCAATAAACCAGTAAAATCACCGCTGAGAGAGGTAGGGAG
AAATTTTTCCTATCGTAACGCAGATGTTTATAGCTTTGGCAAAAGATCCAGGATCGCTAA
GAAGGAACCAATGAAAGAAACCAACTCCAACCCAAAAGAGTTTTCAAGCATTGAACATTT
GCAAGCATTGGACGACGATTTGACTAGCTTATCTTGGCTTTGCAGCGACAAAAGTCTGAT
CAAGACTATCCGCCAATGCAATCCAGATGACGCTGGCATCAGCCTCAGTGGCGATGAGAG
CGACGGTCAAGGCGATGGCAAAAACAGCATCAATCCAGACGACATGGCAATTTTTACAGC
AAAATCAAAGGTTGAAGGGACTGGTCAGGTTGGATACTCAGATGAACATGGAGCAGCTTA
CAATCCGAAGGGTAAACCGCCATATTCATTCAGCTGCCTCATTTTCATGGCAATTGAAGA
TTCTGATAAGAAAATGCTTCCAGTCAAGGACATTTATACATGGGTTTGCAAGCACTTTCC
ATATTTTCAAACGGCTCCTGCTGGATGGAAGAATTCTATACGCCATAACTTGTCCCTCAA
CAAATGTTTCAAGAAAGCGGAGGGTGGCTATGTTGAACTTGTGCCTTCTCATGAACAAGC
AAAGGGATCTCTCTGGTGCATAGACCCTGCCTACCGTCCGAACCTGATACAAGCCTTGAA
AAGATCCCCATATTATCCTTATCTTTATCCGTCCGGAATAGGCCAACCACTTTCGCTAAA
CAACCTTGCCAGCCTGTTACCTAGTGTCAGATCAGGAAGGATTCCTATGTGGTCACCTTA
TATGTCTGCTTCCACAGATTCTGCATGGGCAGATCCTGATGTTGCTTCAGCTGCGCTTAA
TCTATTGGGCTTGAAGAAGAATGATATCTCGGAAAATCAAAACCAGAATGTGAAAAGTAC
TCTCATGGAACTGACCGAAGAAATGTACAGAAGAGTTCAAACAATGAATCAATCCTCACA
AGAATCTACTATCGGAATGATTCCACTAATCATAACTGATCCGTCCGAAGATCATACTTA
CACGAGTACGCCTCAACAGAACTGCAAAAATGAGAGATGCGAGACGCCGGAAAGTGTGAA
ATCTGCTCCCGACGCTGCCTACGAATTCGAAACCTGCGGTACGGATATGGATAGTGATAT
TGCAGATACCGTGAGCATAGATGGTAGCGGAGCATTTAGTGACCAGAACAAGCAAGAAAT
AGATTTAGGAGACAGTGGGTTCGCTAGTTTACGATCCCATCCGATGCCTAAAAGAAACCG
CAGATCACTTCAAGAAAAGAACGCAGGCAAGAGAAAAAAACCTGCTGACCACTCGCCACC
CGCTAAGCAAGCGAAGCAAAGTTGTGGTTGGAACGGAAAATCTAAAAGTCAATCGAAACG
TCTTCCTAAGAAGAGCAAGAAAACACTCAAGGTTGATTTCCAGAATCACAGGAAGTCCAA
GTCGATACAGAGTAAGCCGATGAAATTAGTCAAGAAGGAATTGCTGACCAGTGACGATGA
TAGCGGCAAGGATTCTCCGAAGCCTATTAAGAAGACAAGATCTGTCTTTCCCAGAAAGCA
AAATTTCTATTCAAAAACGTACAAATCGAGAACAAAAGCCGCTGAGAATCCGGGATCCCC
GTATGGAACAAGATCCAACACGTTGTTGGAGCGTAAAAAAAAGGCGGATGAGTGTCGGAA
TCGGCGCAAATCCAGGCGACGACGCCAAAGCATCACATGCATCGACGTTGATGATGAGGT
CAAGCTTGCAGCTGGATCCCTCCTTCATCTTGCCGGTTTCAGCTGTGAAGGTAATGGTGA
GAACGCATGTCACAGTTTGGATGTAATCTATGAACAAGAATCTATCAAGCCATATGCTCC
TATTTTATACTTGCGAGTGGCGATACTGATGTCAAGACTGCTGCAGCCATTTCGTAGTAC
CATGTGTAAATTGATCTCTGTATATATATTTTTGTGTTATTGTAACTTTCTCTTGAATCA
TAACATCAGGAAACACTTTGAAAAATCATTCATGCTATACTCTGGCAAGATGGTTGTAGA
GTTCTCTTAACTTATTCTGCTTGAATCATATTTTTCTCTCCTCTGCATATTCCGCATTTT
GTTATGAATTACGCTCAGCTCATTTGCTTATGCATTTTGCATGCTGGCAAGCTATATTCA
AACGTTTGCAGCTTCAGGTATATCAAATGCAGATGGTAAAGAATAAATTGCGAGTTGAGT
GCAGTTTTAGTACGGTAACTACAAGGTGTCCCTTGATTCTCTTTAGTAAGATTGGTCATG
TTACTGCTAGAAATCCTGCATAGTGTAATGTCTAATACTACCTTATTTTGTGATAGATTA
CCTGAAGCATTTCCTGAGAATATTATACTATTATAGTATGATAAGATTTATATTACTAAA
TTGCCTTGCATCAATTTTATTTTTATTCAATTGTAGGTGTAACTGCCTTGCTATTCCGGC
AGCACTCATGCTATACCTCTCAATGCTCTGCCGTTTTATTGCGTTTTGTTGAATATGTTC
AGCGGTTATATGATAAAAAAAGATAAACCTCTTCTGAATAATGAAGTAAATTATTAACCA
GTTGCAGCAGTTATTGATTTTTGTGGCTTCGAGCATAGCTTTTAAATTCTCGATCAATGA
TTTTCTTTAAACTTTCCTACAAAATAGTGATGTGAAAGTGTTTTTCAATTAACCGGTTCT
TCCATGCAATTTTTTTCTCCAATCAGCTTAGCGGGTGTCAAATGTTTGGAAGCAACTCAT
CACCAGAATTTTAATTATAGTGTGCAGTATGTCATCCCTGTAAGCCATATTACAGCAATC
ATTCTCATACTATTTGTTCACGTTTTTCAATCATTGATTTTCGAAATGTATCTCTCTTCT
GTCAACTATGCAACGTAGTTGAATCCAATTTATCGTCTTCCTATTGTCCATGCATTTTTC
CTTTCCTCGATCGAGCGAATCGACTAAAATATAGCAACTGCCAGCTATGTGTTCGTAGAT
ACATATTTCTATAGCTCCTTTTCTTATGAAGTTTCTGAGACTTGATACTGATTTCAAAGC
TAGCTGCAAAACTTAGATAACGGATAAATAGCTCTATTCTTGCCCTTGCTGTGTAATGAA
ATGCATTTTACCGTAATTTTCCTTTTTTGTTTTTTTCTTGTACATAGTTTTCGATGCAGT
AAACTTCCATGCTCAACCTGAACAATAACAAAGTCTTCGACTGGAATATCCAGCAACAAA
TTGACTTACTTTTACCTAACCGTGTAGGTCCGATAATATATCTGCTTATATAACTGACTG
ATGAAGTAATTTAACTTGTTATGGACGTGACCAACGATTAAATGTATAAAATTTATCAAA
GTGATATTTGAAATCTCTAAATAAATAGTAAAACACGAAGCATTATTTGGGATATAAGGA
ACACATACTAAACACAGTCTTGTAATATAAGTTGAAAGAGATATATTTTTAGGCATTGTA
CATGTATTCATGTACACAATGTATATGAATTTTTTCAAATATGCCGCAATCATTTTCTGT
TATTTAGGTGTTATGGATATTATTATCATATCAAATAGAACGGTAGATCTCTTAAATCAA
GAGAATATATCAGTTCAAATTTGAACTGTAATCATCAAAATCATCCAACTATCTCAGTGC
CATTTTCTGATGCAGTACATTATTTCATTTGTACTGTGTTGTATCTCCTCAAAAGGTTTC
ATACTATAGAATTCATCAACAACATCGCATTGCTTGAAATTATAACTTGTCGCTGTTCAA
AAGTATGTTCCTACAAAGAGAAATATTTCTATGCAAGGTCGAGTAAAACCATTTGAATAT
GATTAATGCAGTCTTGCAACTCTGATGTGTATGTAATTGATGAGGAGATGTTCAATGTTG
TACATTACTTCTGGCTAGTACAGTTGTGGTAAATTGTTTTCAAATATCCTACATTGCATC
ATGAACTGCTGTTTAACATGTGTGATTGCATTTGTTACATGCTAATATTACAAGGTGATT
GATGTCATCGTATCGATAACTCCATCGTATACTCTATAGATTTGTCTCGATCACAGTATG
AACAGTCATTGACTAACTGGAAAATATAGCTGTCATCTTTTTGTTTTTTTGTTTCTAATA
TTGGTTAAAGATGAATAAAACCAGAGCGTTTCTTGCTCATAGAGGT

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[348-459] 1.1E-33
SMART
Fork_head_dom (IPR001766) - T[359-456] 1.5E-42
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[361-457] 1.18E-29
Pfam
Fork_head_dom (IPR001766) - T[361-450] 5.3E-30
ProSiteProfiles
Fork_head_dom (IPR001766) - T[361-453] 27.972
CDD
Fork_head_dom (IPR001766) - T[361-444] 4.05812E-37
ProSitePatterns
TF_fork_head_CS_1 (IPR018122) - T[361-374] .
PRINTS
Fork_head_dom (IPR001766) - T[361-374] 4.8E-16 - T[382-399] 4.8E-16 - T[405-422] 4.8E-16
ProSitePatterns
TF_fork_head_CS_2 (IPR030456) - T[405-411] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FOXN1_HUMAN 55.814 % 101 5.75E-22
FOXN2_HUMAN 30.657 % 160 1.72E-42
FOXN3_HUMAN 35.236 % 178 4.62E-48





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